Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme39294g00001 CAAGTTAACAAGTCGCTTGAAGTGGGTAAACGACGTACCGGAAGATCCATAAGTATCCTCGATATTTACGGATTTGAGTCATTCCAGAAAAACAGCTTTGAACAGTTATGCATAAACTATGCCAATGAGAGGCTTCAACAACATTTCAATCGGCATCTGTTTAAACTGGAGCAGCAGGACTACGAAATAGATGGCGTTGATTGGACCAAAGTAGATTTTGAGGACAATCAAGAGTGTTTGGATCTCATTGAGAAG 255 0.4039 QVNKSLEVGKRRTGRSISILDIYGFESFQKNSFEQLCINYANERLQQHFNRHLFKLEQQDYEIDGVDWTKVDFEDNQECLDLIEK 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme39294g00001 85 Gene3D - 28 85 - -
Trme39294g00001 85 PRINTS Myosin heavy chain signature 16 44 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme39294g00001 85 PRINTS Myosin heavy chain signature 69 85 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme39294g00001 85 ProSiteProfiles Myosin motor domain profile. 1 85 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme39294g00001 85 Pfam Myosin head (motor domain) 1 85 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme39294g00001 85 PANTHER MYOSIN 1 85 - -
Trme39294g00001 85 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 85 IPR027417 -
Trme39294g00001 85 Gene3D Kinesin motor domain 6 27 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme39294g00001 Trme-Chr39294 1 477 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme39294g00001 1 85 Myosins gene family AT1G50360 85.882 1.48e-47 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme39294g00001 K10357 - qsa:O6P43_029040 170.629