Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme39253g00001 ATGCTAGCAGGCTTGAAGGATGATGATTTTGGCATGAATTCTCCATTATTGTGGCTTCGAGATGCAGATAGAGGGCTTCAGACTCTTAATTTTCAAGGGATGGGTGTTAATCCTTGGATGCAGGCGAGGCTCGATCCGTCCATGATGAATATGCAACCAGACATGTACCAAGCTATGGCAGCTGCTGCACTTCAGGATATGAGGACTTTAGATCCTTCTAAACAGCATCCTGCCTCCTTACTTCAATTTCAGCAGCCACAGAATTTCCCCAATGGTAATGCTGCTTTAATGCAAAACCAGATGTTGCAGCAATCTCAACCTCAGCAGGCTTTTTCAAAGAATCAAGAAAGTCAGCTTCCATCTCAATCTCAGGCTCAAACACAAAATTTTCAGCAGCTTCTTCAGAATCAGCACTCATTCACTAATCAAAATTATCATCATCTGCAACAACAGCAACAACTACAACAACAGCAACAACAGGTACAACAGCATCAACAACAGCAGCAGCAGCAGCAACAAGTTGTAGATCGTCAGCAAATTTCAAATGCTGTCTCTACAATGTCTCAGTTTGTTTCGGCACCTCAATCTCAATCAACGCAGCCCATGCAAGCTATCTCTTCAATTGGCAATCAACAACATTTTTCTGATTCAAATGGGAACCCTGCAACTACTGCTATCGTTTCTCCTTTGCACAATATGTTAAGTTCATTTCCCAATGACGAAACATCTCACCTTCTCAACCTTCCTAGACAAAACTCTTGGGTTCCTGTTCAATCTTCAACTGCATGGCCATCGAAGCGCATTGCAGTTGATCCTCTCCTTTCTTCCGGAGCATCTCATTATGTTCTGCCTCAAGTGGAGCAGCTAGGGCAGTTACAGACTACCATGTCTCAAAATGCTATTACCTTGCCCCCATTTCCTGGTAGGGAGTGTACAATAGAAGGGAACACCGATCCACAAAACCATTTGTTGTTTGGTTTTAACATAGAGCCCTCATCACATCTAGTTTATAATGAGATGTCAAACCTTAAGAGGGTCA 1039 0.4293 MLAGLKDDDFGMNSPLLWLRDADRGLQTLNFQGMGVNPWMQARLDPSMMNMQPDMYQAMAAAALQDMRTLDPSKQHPASLLQFQQPQNFPNGNAALMQNQMLQQSQPQQAFSKNQESQLPSQSQAQTQNFQQLLQNQHSFTNQNYHHLQQQQQLQQQQQQVQQHQQQQQQQQQVVDRQQISNAVSTMSQFVSAPQSQSTQPMQAISSIGNQQHFSDSNGNPATTAIVSPLHNMLSSFPNDETSHLLNLPRQNSWVPVQSSTAWPSKRIAVDPLLSSGASHYVLPQVEQLGQLQTTMSQNAITLPPFPGRECTIEGNTDPQNHLLFGFNIEPSSHLVYNEMSNLKRV 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme39253g00001 346 MobiDBLite consensus disorder prediction 101 126 - -
Trme39253g00001 346 Coils Coil 147 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme39253g00001 Trme-Chr39253 19 1057 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme39253g00001 4 346 B3 DNA Binding Superfamily AT1G30330 47.027 1.42e-61 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme39253g00001 - - vvo:131603524 518.85