Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme39226g00001 GTAACATTGATTCATCTGGAGGATAGGCCTCGACCAGGGGTTTTTGATGTTATTCAAGAATTGCAAGATGAAGCAAAGTTTCGCGTGATGATGTTAACTGGTGATCATGAATATAGTGCAAAGAGAGTTGCAACTGCTGTGGGCATCAATGAGTTTTATTGCAACCTGAAGCCTGAAGATAAGCTGAGCCATGTAAAGGATATCTCAAGAGATATGGGTGAGTTCCTTGATTTGAGCTTCTTCATTTTTTATGTCGCCGATAGCAATGATATTATGTATGCCTAG 285 0.4 VTLIHLEDRPRPGVFDVIQELQDEAKFRVMMLTGDHEYSAKRVATAVGINEFYCNLKPEDKLSHVKDISRDMGEFLDLSFFIFYVADSNDIMYA 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme39226g00001 94 Gene3D - 1 91 IPR023214 -
Trme39226g00001 94 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 1 74 - -
Trme39226g00001 94 SUPERFAMILY HAD-like 3 73 IPR036412 -
Trme39226g00001 94 Pfam haloacid dehalogenase-like hydrolase 4 66 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme39226g00001 1 73 Primary Pumps ATPases AT4G37270 72.603 9.76e-32 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme39226g00001 K01534 - gmx:547503 137.887