Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme39219g00001 ATGGCAGCCACCATTGGAAACTCTAGTGTTTCTTCTAGACCTAGTGTTTTGAAAATTGGAGCATTGTTTACTGTTGATTCTGTGATTGGAAGATCAGCTAAACCAGGAATCATGGCTGCAATTGAAGATGTTAATGCTAATAAGAGCATTCTTCCTGGTGTTAAACTTGAAGTTATTTTACATGATACAAATTGCAGTGGATTTCTTGGAACAGTGGAAGGGGAAAATACCCCTGGTAATCCAGGTTCGGTCGAGAGGTAG 261 0.3985 MAATIGNSSVSSRPSVLKIGALFTVDSVIGRSAKPGIMAAIEDVNANKSILPGVKLEVILHDTNCSGFLGTVEGENTPGNPGSVER 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme39219g00001 86 Gene3D - 14 75 - -
Trme39219g00001 86 SUPERFAMILY Periplasmic binding protein-like I 12 71 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme39219g00001 Trme-Chr39219 39 547 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme39219g00001 10 72 Ion Channels AT1G05200 57.143 4.69e-22 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme39219g00001 K05387 - gmx:100799912 109.383