Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3916g00001 AATGAAAGTGAGGCTATCAAACATATTGTTGAAAATGTGATACGTTTGCTTGATAAAACAGATTTGTTTATTGCTAATAATCCAGTGGGAGTTGAATCTCGTGTAGAAGATATGATTCAATTGCTAAACCAAGATATTGAACAATCAAATGATGTTCTACTTCTAGGGATGTGGGGTATGGGAGGTGTTGGTAAAACAACCATTGCGAAAGCCATTTACAATAAAATTGGCCGCAATTTTGAAGAAATTGGAATAAGTAGGCTTGTTGAGCGAAGCCTTGTAACTGTTGATGATAAGAACAAACTTAGAATGCATGATTTGTTGCGAGATATGGGTAGAGAAATCATTCGTGAGAAATCACCAGAGGACCTTGAGGAGCGTTGCAGGTTGTGGTTTCATGAGGATGCCCTTCATGTATTATCAGAACAATCTGGAACAAAAGCTATTAAGGGGCTGTCTTTGAAGTTGCCAAGAGCCAATGCAAAATGTTTTAGTTCTAAAGCATTCAAGAAGATGAAGAGACTCAGACTGCTTCAACTTTCTGGGAGAAAATTTAGTTTCCATCGAGTTAGAGAATAG 579 0.3748 NESEAIKHIVENVIRLLDKTDLFIANNPVGVESRVEDMIQLLNQDIEQSNDVLLLGMWGMGGVGKTTIAKAIYNKIGRNFEEIGISRLVERSLVTVDDKNKLRMHDLLRDMGREIIREKSPEDLEERCRLWFHEDALHVLSEQSGTKAIKGLSLKLPRANAKCFSSKAFKKMKRLRLLQLSGRKFSFHRVRE 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3916g00001 192 Pfam NB-ARC domain 34 114 IPR002182 GO:0043531
Trme3916g00001 192 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 83 180 IPR044974 GO:0006952
Trme3916g00001 192 Gene3D - 10 144 IPR027417 -
Trme3916g00001 192 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 114 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3916g00001 Trme-Chr3916 214 1729 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3916g00001 1 81 WRKY Transcription Factor Family AT4G12020 38.272 1.26e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3916g00001 - - tpra:123910008 198.749