Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme39141g00001 ATGGAATACAATCAGGATCTATTATTCAGCAAGGTTCCTGACTACGGCCATGGTCATGGCCATACTGATGCTGGTGCTGATGATCAGACCATTTCAAAAAGAAGGAAAGCTGCAGGTGATGATGGTAATGAAAGCGACGAAGAAGCTAAGAGGGGCAAAATGCTTGAGTTGAGCCACACTAGCCCTACTGGTAGGGGAAGAGGCCGAGGTAGAGGTAGAGGACGTGGTCGAGGTCGAGGACGAGCTATACCAAGAGAGGGACATCATCAGGACACTGAGTCTGAGCCTTGTCCTTCTGTTCAGCAAGTTAGCCAACATACTCTAGATACAAATGTGGCTATACTTGATGGCTCAGAGTCAAATGAGTTACCAAAGACGAGTGTTGTTATTCTTCCTGTTGATAACTCCGACTCACTCCTTAATATTGATCTGAATGCCAATATGAACGAAAATGATGACAAAAAGGCTAGCGCAGTTGCTAATCTCACACCTACTAATCCTGAAGCCGCTAATCCCCCATTGTCTGTACCTCCTCCAACAGACATCAAGCATCATGAAGAAATTCCGGGCTGGTCCCTTTCTGAGGTGGACAAGATGGCCATTGATTCAATGCAGCTTGCACAG 624 0.4631 MEYNQDLLFSKVPDYGHGHGHTDAGADDQTISKRRKAAGDDGNESDEEAKRGKMLELSHTSPTGRGRGRGRGRGRGRGRGRAIPREGHHQDTESEPCPSVQQVSQHTLDTNVAILDGSESNELPKTSVVILPVDNSDSLLNIDLNANMNENDDKKASAVANLTPTNPEAANPPLSVPPPTDIKHHEEIPGWSLSEVDKMAIDSMQLAQ 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme39141g00001 208 MobiDBLite consensus disorder prediction 163 188 - -
Trme39141g00001 208 MobiDBLite consensus disorder prediction 1 105 - -
Trme39141g00001 208 MobiDBLite consensus disorder prediction 16 55 - -
Trme39141g00001 208 MobiDBLite consensus disorder prediction 79 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme39141g00001 Trme-Chr39141 1 967 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme39141g00001 8 101 CCAAT-HAP5 Transcription Factor Family AT3G12480 50.515 1.54e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme39141g00001 K21752 - gmx:100801593 211.846