Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme39119g00001 ATGGCAATGGGATACTCATCTTCAGATTCCTTTGATCAACACTCAATGCAGTCGAAACATTATCAGTATGACTTAAATGGTATGAACTCAACCCCAAAGGTTTCAACCATTAGTGCTGCAAAGACAGATATATCATCAATGGCTGCTTCTATAAGAAGTAGCTCTTCTAGGGAAGCTGATCGCTCTGGCGATTTATCGATGAGCAATGCTAGTGATCCGGATAGTGAATGGGTTGAGGAGGATGAACCTGGGGTGTACATTACTATCAGATCTTTGCCAGGTGGTAAAAGGGAGATCAGAAGAGTCAGGTTCAG 314 0.4268 MAMGYSSSDSFDQHSMQSKHYQYDLNGMNSTPKVSTISAAKTDISSMAASIRSSSSREADRSGDLSMSNASDPDSEWVEEDEPGVYITIRSLPGGKREIRRVRF 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme39119g00001 104 PANTHER PROTEIN BREVIS RADIX-LIKE 1 16 104 IPR044532 -
Trme39119g00001 104 ProSiteProfiles BRX domain profile. 75 104 IPR013591 -
Trme39119g00001 104 MobiDBLite consensus disorder prediction 46 73 - -
Trme39119g00001 104 Pfam Transcription factor regulating root and shoot growth via Pin3 75 104 IPR013591 -
Trme39119g00001 104 MobiDBLite consensus disorder prediction 46 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme39119g00001 Trme-Chr39119 583 896 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme39119g00001 66 104 Major Intrinsic Protein MIP AT1G31880 74.359 3.67e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme39119g00001 - - gmx:100794109 153.295