Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3903g00002 ATGCGAGGCTGCACCATAGATTTTGTGTCTTTGCTGTGCTGCTGTGCAAAAGTGTTTTTGAGACATCGGAGCACTTTACTCATAACGTTGGTCAACGTTCCCTTATTTGTGTTGTTATTTTGTCTTCTATTATTCACGCCGTACACACGATATGGAGGTCCAGGATTGGTCGGGGGTGCTATGTTGATATCAAAAAAGTCACAGGATTATGGCGGTCTTACAAGAGGTCTTCATGAGAGTGCTAAAGTGATTGAGAAGAATGCTGCACAGCTCTGTGTTCAAGCTGAAGATTGTGACCAACCAGATTATGTCAAGTTGGTGAAAGCTCTTTGCGCAGAGCACAATGTTGGCTTGTTGACTGTTCCCAATGCAAAGACCCTTCGGTAA 387 0.4393 MRGCTIDFVSLLCCCAKVFLRHRSTLLITLVNVPLFVLLFCLLLFTPYTRYGGPGLVGGAMLISKKSQDYGGLTRGLHESAKVIEKNAAQLCVQAEDCDQPDYVKLVKALCAEHNVGLLTVPNAKTLR 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3903g00002 128 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 65 127 IPR004038 -
Trme3903g00002 128 PANTHER 40S RIBOSOMAL PROTEIN S12 65 127 - -
Trme3903g00002 128 SUPERFAMILY L30e-like 63 127 IPR029064 -
Trme3903g00002 128 Gene3D - 61 128 IPR029064 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3903g00002 62 127 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 74.242 1.54e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3903g00002 K02951 - gmx:100786733 114.005