Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3902g00001 ATGCTAAAGGTTATAGCTGCAACAGTAGCAAGTGATCCTGAGAAATATAGTGAAGCATTTCTTGGGAAGCCAAATGCAGAGTATTGTAACTGGATTCTTGACCCAGAGAAGTGGGGAGGTGCAATTGAACTTTCAATATTAGCGGATTATTATGGACGCGAGATTGCAGCATATGATATTCAGACAACGCGGTGTGATTTGTATGGTCAGGAAGGTAACTATTCTGAAAGAGTGATGCTGATTTATGATGGTCTCCACTACGATGCTTTAGCTATGTCTCCTGTTGAAGAAGCTCCCGAGGATTTTGATCAGACCATATTTGCGATACAAAAAAACAGAAGCATTGGACCTGTCGAGGAGATTGCTCTAAATTTTATTAAAGACCAACATAG 392 0.4031 MLKVIAATVASDPEKYSEAFLGKPNAEYCNWILDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQEGNYSERVMLIYDGLHYDALAMSPVEEAPEDFDQTIFAIQKNRSIGPVEEIALNFIKDQH 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3902g00001 130 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 3 130 - -
Trme3902g00001 130 SUPERFAMILY Cysteine proteinases 5 90 IPR038765 -
Trme3902g00001 130 Gene3D - 1 130 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3902g00001 1 130 C2H2 Transcription Factor Family AT1G50670 74.615 1.18e-69 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3902g00001 K13719 - gmx:100499809 240.736