Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme389527g00001 AAGCAATTGTGCAAGAGCATTAACCCTGATGAGGCTGTAGCTTACGGGGCAGCTGTTCAGGCTGCTATGTTTAGTGAAGACATTAAGAATGTTCCGAAGTTGGTGCTGCAGGATGTTACACCTTTGTCTCTTGGTAGGTCAATACATGGAGATATCATGGATGTGGTGATTCCCAGAAACACTTGCATTCCTTTCAAGAAGACAGTAGAATATGTTACATCTAGAGAAAACCAATCTAGTGATTCGATTATGGTTTATGAGG 262 0.416 KQLCKSINPDEAVAYGAAVQAAMFSEDIKNVPKLVLQDVTPLSLGRSIHGDIMDVVIPRNTCIPFKKTVEYVTSRENQSSDSIMVYE 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme389527g00001 87 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 18 87 IPR029047 -
Trme389527g00001 87 PRINTS 70kDa heat shock protein signature 7 27 - -
Trme389527g00001 87 PRINTS 70kDa heat shock protein signature 33 52 - -
Trme389527g00001 87 Pfam Hsp70 protein 1 87 IPR013126 GO:0005524|GO:0140662
Trme389527g00001 87 PANTHER HEAT SHOCK PROTEIN 70KDA 1 87 IPR013126 GO:0005524|GO:0140662
Trme389527g00001 87 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 34 87 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme389527g00001 Trme-Chr389527 49 310 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme389527g00001 1 87 Calmodulin-binding Proteins AT3G12580 60.227 1.70e-25 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme389527g00001 K03283 - tpra:123896225 132.494