Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38858g00001 ATGACTCAAAATCTAGCAACAATTCTGGATAAGCACAATGAACCGATTAGAGTGGATCCTGATAGAGGAAGGGCTAATGCATTTGATTATGGATCAGGGTTTGTGAACCCTGCAAGAGCACTGGAGCCTGGTCTTGTATATGATTCACAGCCTGAAGATTTTGTTGCATTCTTGTGTTCAATTGGTTATGATGAGAAGTCACTCCATCTCGTTACAAGAGACAACAGCACATGCGATGGGGCATTCAAAACACCATCTGATCTCAACTATCCATCTATTGCAGTTCCCAATCTTGAAGACAACTTTTCAGCAACTCGAGTTGTGACTAATGTTGGAAAAGCTAGAAGTATATATGAAGCTGAAGTGTTGTCTCCAGCTGGAGTCAATGTTACTGTTGTGCCAAACCG 407 0.4177 MTQNLATILDKHNEPIRVDPDRGRANAFDYGSGFVNPARALEPGLVYDSQPEDFVAFLCSIGYDEKSLHLVTRDNSTCDGAFKTPSDLNYPSIAVPNLEDNFSATRVVTNVGKARSIYEAEVLSPAGVNVTVVPNR 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38858g00001 136 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 6 135 IPR045051 -
Trme38858g00001 136 Gene3D Peptidase S8/S53 domain 22 54 IPR036852 GO:0004252|GO:0006508
Trme38858g00001 136 Gene3D - 58 136 - -
Trme38858g00001 136 Pfam Fibronectin type-III domain 87 135 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme38858g00001 Trme-Chr38858 445 960 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38858g00001 22 134 Subtilisin-like Serine Gene Family AT4G10540 44.248 2.01e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38858g00001 - - gmx:100780538 239.965