Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38854g00001 GTATATGCTGAAATGCATCAGCAATTTTCAGCTGGAATGCAGACAGTAGCAGTAATTCCTGTGCTTCCTCACGGGGTTATTCAACTTGGTTCTTTCTTTCCGATAATGGAGAATATGGGATTTGTGCATGAAGTAAAGAGCCTGATCTTGCAACTAGGGTGTATTCCTAATGCCCTTCTATCCGAGGACTATTCAGCTAAACTTTCAAATGAAATACTTGATGGACGTGCTACTTCCGGTGTGCCCGTGTCTGTTGATACATCAGTCATTACCTCAAATTCCACTCCTTCAGTGGTTAACGGTTCCAATCAGCAAAGTTATTCATTTCATGCTTCAAAGCCTATTGTTCAAAGACAAGGTAGAGTTGTGGAGGCTAAAGTAATACCCTCAAAT 393 0.4122 VYAEMHQQFSAGMQTVAVIPVLPHGVIQLGSFFPIMENMGFVHEVKSLILQLGCIPNALLSEDYSAKLSNEILDGRATSGVPVSVDTSVITSNSTPSVVNGSNQQSYSFHASKPIVQRQGRVVEAKVIPSN 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38854g00001 131 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 106 IPR043561 GO:0003700|GO:0006355
Trme38854g00001 131 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 7 48 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme38854g00001 Trme-Chr38854 401 1061 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38854g00001 1 64 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 73.438 9.65e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38854g00001 - - cam:101492357 192.2