LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trme3878g00001	ATGGGAGATGGTGCTGCAGTGACATCATCTGCAACCATGATGGAAGGTCCACCACAAGATGAAAATTCAATGGATTTTGATTACATGAGTGAACTTTTGTTAGATGGTTGTTGGTTGGAAGCTTCTGCTGATGGATCTGAGTTCTTACTGCAAAGTTCTCCTTTTTCCAATCCAATCTTTGACCCTTCATTCTCTTGGCCTTCCTTGGAGAATACCGAGCCACCCCGCAATGAGGATGGGCGCGTAGGTATTGAACAAGAAAGCCAGATTATAGTTAATAATGCTGGTAGTAGTGACCGGCAGCAGTGTGAGTTTGAGACTCGTTCGGGTGAAGGGGTTAGTAGGTTGTGGATTCCACCGACACCTAATCCAGGACCTGGTGGATCTTTCATAACGGAGAAGCTGATAAGGGCTCTCAAGTGGATCAAAGATTTCAATAGGAACAAAGATATGCTTATACAAATATGGGTGCCGGTTAATAGAGGGGATGATAGGCCAATTCTGAGAGCTAATGATCTTCCTTTTTCACTTGAATCAAGGTCTTTAAACCTTGCAAAGTACCGAGAGATCTCTGTAAGATATCAGTTTTCTGCAGAGGAGGAGGACTCGAAGGAGTTGGTGGCGGGTTTGCCTGGTCGAGTTTATAGGGATAAGATTCCTGAGTGGACGCCTGATGTTCGATTCTTCAGGAGTGAAGAGTATCCACGAGTTGACCATGCTCAAGAGTGTGATATACATGGAACATTAGCGGTTCCGGTGTTTGAACAAGGCAGCAGGACATGTTTGGGCGTTATTGAAGTGGTGATGACTACACAGCAAAGCAACTATGGCCGTGAACTTGAGACTGTTTGCAAAGCGCTCGAGGTTGTTGATCTCAGAAGCTCTGGACATTCAAGTCTTCAGAATTTGAAGGCGTGCGACAAATCCTATGAAACTGCACTACCTGAGATTCAAGAGGTTTTGAGATCTGCATGTGAAATGCACAAATTACCTTTGGCTCAGACTTGGATCTCATGCATCCAACAGGGAAAAGACGGGTGCCGGCACTCCGATGATAATTATGCAAACTGTATATCTCCGGTGGAGTATGCGTGCTATGTTGGCGATTCTTCAGTTAGGTTTTTTCACGAGGCTTGCATGGAGCATCACTTGTTAAAAGGTCAAGGTGTTGCCGGGGGCGCTTTCATGACAAACCAACCGTGTTTCTCAGCTGACATAACTTCTTTAAGCAAGACAGATTATCCATTGTCTCATCACGCCAGGTTGTTTGGATTGCGGGCTGCAGTTGCCATACGACTCCGAAGCATCTATAGTACTTCAGATGACTATGTTCTCGAGTTCTTCCTGCCTGTAGATTGCAATGACAGTGAAGAACAGAAAAATATGCTCACATCTTTGTCCATGATTATTCAAAGGGTTTGCCGCAGCCTGCGAGTTATAACAGACAAGGAATTGGATAAAGATAACTTATCATCAAATGAAGTGATGGCTGTTGCTGATGGTCGATTTGCTACAAATGCAATTTGGTCGGAATCTCAACACAGGAGGATGGCTGCCTCATTGGGCRGTGAAGAAAAGTTTAGCGAAACAATGGGTAGAAAATTCTYGAAACAAAGGCAGCAACAGGARACTCTTACTTTAAAAGGAGATCTTGATTGTGGTAGGGCGCATTCTCCTTCTGTGGAGGGTACTTTCTTGTCAAGTTTGGGAATAAATAGAACTGGAGAGAAAAGACGGGCTAAGGCAGAGAAAACTATCACTCTTCAAGTCCTTAGGCAATATTTCGCTGGAAGTCTAAAAGATGCTGCGAAAAATATTGGCG	1822	0.4418	MGDGAAVTSSATMMEGPPQDENSMDFDYMSELLLDGCWLEASADGSEFLLQSSPFSNPIFDPSFSWPSLENTEPPRNEDGRVGIEQESQIIVNNAGSSDRQQCEFETRSGEGVSRLWIPPTPNPGPGGSFITEKLIRALKWIKDFNRNKDMLIQIWVPVNRGDDRPILRANDLPFSLESRSLNLAKYREISVRYQFSAEEEDSKELVAGLPGRVYRDKIPEWTPDVRFFRSEEYPRVDHAQECDIHGTLAVPVFEQGSRTCLGVIEVVMTTQQSNYGRELETVCKALEVVDLRSSGHSSLQNLKACDKSYETALPEIQEVLRSACEMHKLPLAQTWISCIQQGKDGCRHSDDNYANCISPVEYACYVGDSSVRFFHEACMEHHLLKGQGVAGGAFMTNQPCFSADITSLSKTDYPLSHHARLFGLRAAVAIRLRSIYSTSDDYVLEFFLPVDCNDSEEQKNMLTSLSMIIQRVCRSLRVITDKELDKDNLSSNEVMAVADGRFATNAIWSESQHRRMAASLGXEEKFSETMGRKFXKQRQQQETLTLKGDLDCGRAHSPSVEGTFLSSLGINRTGEKRRAKAEKTITLQVLRQYFAGSLKDAAKNIG	607

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trme3878g00001	607	MobiDBLite	consensus disorder prediction	65	87	-	-
	Trme3878g00001	607	PANTHER	PROTEIN NLP8	94	607	IPR045012	GO:0003700
	Trme3878g00001	607	MobiDBLite	consensus disorder prediction	1	24	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trme3878g00001	Trme-Chr3878	31	2273	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trme3878g00001	19	607	NLP Transcription Factor Family	AT1G20640	51.500	0.0	549

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trme3878g00001	-		-	gmx:100790922	870.152