Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme387517g00001 ATTGTTCACAAGAAAACTGCTGCTGTTTTGTGCTTGACCACGGTCAAGAATGAAGACAAAATGGAATTCAGCAGAATCCTAGAAGCCATTAAGGCCAACTTCAACGACAAGTATGACGAATACAGGAAGAAGTGGGGTGGCGGTAT 146 0.4315 IVHKKTAAVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGG 48
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme387517g00001 48 Gene3D - 1 48 IPR029064 -
Trme387517g00001 48 PRINTS Ribosomal protein L7A family signature 33 48 IPR001921 -
Trme387517g00001 48 PRINTS Ribosomal protein L7A family signature 1 25 IPR001921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme387517g00001 Trme-Chr387517 55 310 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme387517g00001 1 48 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 87.500 2.14e-27 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme387517g00001 K02936 - csv:101218399 101.293