Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme387248g00001 ATGGCTAAAGATGTTGAGGTTCAAGAACAAGGAGAATACTCAGCTAAAGATTACCAAGACCCACCTCCAGCACCATTGATAGATGTTGAGGAACTAACAAAGTGGTCTTTTTATAGAGCTCTTATAGCTGAATTTGTAGCAACACTTCTTTTCCTTTATGTCACTATTTTGACCATCATTGGTTATAGCCACCAGTCTGATCCTAA 206 0.3835 MAKDVEVQEQGEYSAKDYQDPPPAPLIDVEELTKWSFYRALIAEFVATLLFLYVTILTIIGYSHQSDP 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme387248g00001 68 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 7 66 IPR034294 -
Trme387248g00001 68 MobiDBLite consensus disorder prediction 1 23 - -
Trme387248g00001 68 Gene3D Glycerol uptake facilitator protein. 24 68 IPR023271 -
Trme387248g00001 68 Pfam Major intrinsic protein 31 65 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme387248g00001 Trme-Chr387248 1 206 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme387248g00001 1 67 Major Intrinsic Protein MIP AT5G60660 68.657 1.91e-30 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme387248g00001 K09872 - mus:103970064 125.946