Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38691g00001 ATGCAGGAGAGAGGTCTATTAGGACCTCGAAGATCTAGGCATCGGTTAACTCCTGGAACAGTTAAGTTTGCAGCATTTCATGTTCTCTCACTAGAGAGTGGTGAGGGATTGAATGTAATAGAGCTTGCCGAAAAAATTCAGAAATCTGGTCTTCGAGACCTGACAACCAGCAAGACACCCGAGGCATCAATTTCTGTTGCTTTGACAAGAGATGCCAAGCTTTTTGAAAGAGTAGCCCCATCAACTTATTGTGTACGTGCCGCATTTAGAAAGGATCCTGCTGATGCTGAGTCCATTCTTTCCGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCTAGCTGAGGAAGATGCTGATGATGGTGAAAGAGAAGAGTCAGAAAGTGAAGTCGATGAGGATCCTGAAGTAGATGATTTGGTTAATCCTTCAAGTGTTAACAAACCATCTGAACATTGTAATGATTTTTCATCAAGTGGAAAAGAAAATCTAGGTCATGATGCAGAACTTAAAGATGAGTTCGATAAGGATCTGCC 539 0.41 MQERGLLGPRRSRHRLTPGTVKFAAFHVLSLESGEGLNVIELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERVAPSTYCVRAAFRKDPADAESILSEARKKIQIFENGFLAEEDADDGEREESESEVDEDPEVDDLVNPSSVNKPSEHCNDFSSSGKENLGHDAELKDEFDKDLP 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38691g00001 180 MobiDBLite consensus disorder prediction 163 180 - -
Trme38691g00001 180 Pfam HB1, ASXL, restriction endonuclease HTH domain 19 87 IPR007759 GO:0006355
Trme38691g00001 180 MobiDBLite consensus disorder prediction 115 180 - -
Trme38691g00001 180 ProSiteProfiles HARE-type HTH domain profile. 19 88 IPR007759 GO:0006355
Trme38691g00001 180 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 172 IPR044977 GO:0006357
Trme38691g00001 180 MobiDBLite consensus disorder prediction 115 140 - -
Trme38691g00001 180 MobiDBLite consensus disorder prediction 144 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme38691g00001 Trme-Chr38691 1 631 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38691g00001 1 179 Homeobox Transcription Factor Family AT1G28420 64.130 2.65e-69 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38691g00001 - - gmx:100818817 276.944