Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38663g00001 ATGTTTCGACATATAATGAATCCGGGATGGACGTTAGGATGGACTTGGGCTAAGAAAGAAGTTATATGGTCAATGGTAGGAGCTCAAACAACAGAACAAGGTGATTGTTCTAAGTTCAAAGGAAACATACCTCATTGTTGCAAGAAAATCCCTACAGTTGTAGACCTTCTCCCCGGTGTACCTTACAATCAGCAATTCACAAACTGTTGTAAAGGTGGAGTTGTTTCTGCATGGGGACAAGATCCTACACAATCAGTATCAGCTTTTCAAGTTAGTGTAGGACAAGCTGGAACCTCGAACAAAACG 306 0.415 MFRHIMNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNIPHCCKKIPTVVDLLPGVPYNQQFTNCCKGGVVSAWGQDPTQSVSAFQVSVGQAGTSNKT 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38663g00001 102 PANTHER PROTEIN COBRA 1 102 IPR006918 GO:0010215|GO:0016020
Trme38663g00001 102 Pfam COBRA-like protein 2 100 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme38663g00001 Trme-Chr38663 12 317 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38663g00001 1 102 COBRA Gene Family AT5G15630 85.294 8.08e-63 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38663g00001 - - gmx:100798678 218.394