Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38637g00001 ATGTATAGGAATGAAGCTGAGCTGCTTGAAGAAATCATCAATGTTGTGTCGAAGAGTTTGAGTAAGCATCCAGTTAACTCAAAAGGACTTGTTGGAATTGACAAACCAATTGAACATTTGGAATCATTGTTACGGAAAGAGTCAAAAAAGGTCCGTGTCATTGGAATTTCTGGTATGGGTGGTATTGGCAAGACAACTATTGCAGAAGAAATATTTTGCCGAAATCGGTCTCAATATGATGGTGGTTGTTTTTTACCAAAGGTAAGTGAAGAGTTAACAAGACATGGAATGCAATCTTTAAAAGAAAACCTTTTTTCTACATTAATAGCAGAAGATGTGAAAATTGATCCACTAAAAAGGTTGTCTAGTGATATTGTGAGACGGGTTGGCCGCATGAAG 399 0.3684 MYRNEAELLEEIINVVSKSLSKHPVNSKGLVGIDKPIEHLESLLRKESKKVRVIGISGMGGIGKTTIAEEIFCRNRSQYDGGCFLPKVSEELTRHGMQSLKENLFSTLIAEDVKIDPLKRLSSDIVRRVGRMK 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38637g00001 133 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 113 IPR044974 GO:0006952
Trme38637g00001 133 Pfam NB-ARC domain 40 104 IPR002182 GO:0043531
Trme38637g00001 133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 121 IPR027417 -
Trme38637g00001 133 Gene3D - 14 131 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme38637g00001 Trme-Chr38637 39 437 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38637g00001 3 109 WRKY Transcription Factor Family AT4G12020 40.741 6.79e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38637g00001 - - tpra:123920755 244.973