Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme386346g00001 ATGCGGATAATCAATGAACCAACTGCTGCTGCACTTTCATATGGCATTCAAAAGAGAGGTAATTTTGTTGGAAAGCGAAATGTATTCATCTTTGATCTTGGTGGTGGCACTTTTGATGTGTCTCTTCTCACACTTAAGGATGATAGTTTTGAAGTAAAGGCCACTGCTGGTGATACTCACCTAGGAGGAGAGGACTTTGATAATAGAATGGTGAATCACTTTG 223 0.3991 MRIINEPTAAALSYGIQKRGNFVGKRNVFIFDLGGGTFDVSLLTLKDDSFEVKATAGDTHLGGEDFDNRMVNHF 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme386346g00001 74 ProSitePatterns Heat shock hsp70 proteins family signature 2. 30 43 IPR018181 -
Trme386346g00001 74 Gene3D - 1 18 - -
Trme386346g00001 74 PANTHER HEAT SHOCK PROTEIN 70KDA 1 74 IPR013126 GO:0005524|GO:0140662
Trme386346g00001 74 Gene3D Actin; Chain A, domain 4 62 74 - -
Trme386346g00001 74 Pfam Hsp70 protein 1 74 IPR013126 GO:0005524|GO:0140662
Trme386346g00001 74 SUPERFAMILY Actin-like ATPase domain 25 74 IPR043129 -
Trme386346g00001 74 Gene3D - 19 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme386346g00001 Trme-Chr386346 1 223 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme386346g00001 1 74 Calmodulin-binding Proteins AT5G02500 78.378 4.67e-37 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme386346g00001 - - vum:124829379 129.028