Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3859g00001 AAGAAGAAGACTCCAAGGAAACAACCGAAGTTGGAACGCCGTAATGCCACGAAGAACTTCAACTACGATGCTCAACCGTCGTCGCCGGAATCCACCGAGTCGGCGTCAATTCTCTGCACTCGATCGATGGATTTATACGATAAAAAGAGCTTTCGAGTTGAAGGCATCGACGGTGAGTTTGACATCATTTGCCGGAGCCTTGGGCTTTCCGGACCGGAGGATTTCTCAATTCCGGCGGCGGCTTGGGAGGCAATGAAGGTTCGGTCTTCGTCGGATGTTCTGCCGAGGCTGAATTTGTCAGATTTTGATATAACGAAGGTTAGCGAAGAAATCGGAGTTGTAGAGTGTGAAGATAGGGTTTCAATTAGAGATTCTCCTGCCGAAACTAGCGGTTGCTGCAACGCGGGCGATGGTGGTGGAAAAGATAGGGTTTCGATTAGGGTTTTTGACGATGTTAGCAGTAGCTGTACAAGCAGCGAAAATAGGGTTCCGATTAGGGGTTTTGTTGAGACGAGTGCTTGCTCCACCGCCGGCGGCGGTGGTATCAAGGGATTTAGACCTCCGATGCTAAAGCCTCCGCCGGGTGTTAGAGTWTCTGTTGTAGACAGTACGTGTTCCACGTGGGATCTTCTGAGGGATTTCGCTCCGGAAGGKGAAGGAAAAGGAAAAGAGAGAGAAGAAGAKGAAGATAAGAAAGATGATGAAGAAGAAGAGGAAGTTGGCGGAGTGAGATTGAAGATGGAAGAAGAGGAAACTGCTGAGATTATTGGTGAGTTTTCGAGGTCGTGTTCGTTCACTACTTCACACGAAGATGATTCATCTAGCTTTACGACGGATACTAGGTCTAATAGTATATCTCCTAATGTGAGATTGAAGCATGTTATTACTCCTGGTAGCTGGCAAAAAGGTGAGCTTTTGGGGCGAGGTTCATTTGGATCTGTATATGAAGGAATTTCTGAAGATGGATTCTTTTTTGCTGTAAAACAAGTTTCACTGCTTGATCAAGGGAGTCAGGGAAAGCAAAGTGTCGTTCAACTGGAGCAC 1044 0.4684 KKKTPRKQPKLERRNATKNFNYDAQPSSPESTESASILCTRSMDLYDKKSFRVEGIDGEFDIICRSLGLSGPEDFSIPAAAWEAMKVRSSSDVLPRLNLSDFDITKVSEEIGVVECEDRVSIRDSPAETSGCCNAGDGGGKDRVSIRVFDDVSSSCTSSENRVPIRGFVETSACSTAGGGGIKGFRPPMLKPPPGVRVSVVDSTCSTWDLLRDFAPEGEGKGKEREEXEDKKDDEEEEEVGGVRLKMEEEETAEIIGEFSRSCSFTTSHEDDSSSFTTDTRSNSISPNVRLKHVITPGSWQKGELLGRGSFGSVYEGISEDGFFFAVKQVSLLDQGSQGKQSVVQLEH 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3859g00001 348 Coils Coil 229 238 - -
Trme3859g00001 348 MobiDBLite consensus disorder prediction 1 34 - -
Trme3859g00001 348 MobiDBLite consensus disorder prediction 18 34 - -
Trme3859g00001 348 SUPERFAMILY Protein kinase-like (PK-like) 278 334 IPR011009 -
Trme3859g00001 348 MobiDBLite consensus disorder prediction 214 229 - -
Trme3859g00001 348 Coils Coil 218 227 - -
Trme3859g00001 348 Gene3D Phosphorylase Kinase; domain 1 278 347 - -
Trme3859g00001 348 MobiDBLite consensus disorder prediction 213 240 - -
Trme3859g00001 348 ProSiteProfiles Protein kinase domain profile. 300 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme3859g00001 348 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 167 347 - -
Trme3859g00001 348 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3859g00001 Trme-Chr3859 10 2320 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3859g00001 1 347 MAP Kinase Kinase Kinase AT4G08500 39.842 9.72e-51 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3859g00001 K13414 - gmx:100804388 323.168