Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38536g00001 GCAAATGATATCACCACTATAGAGTCCTTGCAATTTGATTTTGACACCATTGAAGCAGCCACCAACAAATTCTCTGCAGAAAATAAGTTGGGTGAAGGTGGATTTGGTGAAGTTTTTAAGGGAACTCTTCCAAGTGGACAAGAAATAGCTGTCAAGAGACTCTCCAAAAGTTCTGGACAAGGTGGAGCAGAATTTAAGAATGAAGTTGTTGTAGTTGCCAAGCTTCAACACAGAAATTTGGCTAGGCTTCTTGGATTTTGCTTGCAAGGAGAGGAAAAGATACTTGTTTATGAATATGTAGCCAACAAAAGTTTGGACTATACTCTTTTTGTTTTAACCCTACGGTTTATAATGGAAGGGGCCTTGATAATTCGAAGTTTGGCCAGGAGGCAAGCAAACTTTGGCCAATGA 411 0.3966 ANDITTIESLQFDFDTIEAATNKFSAENKLGEGGFGEVFKGTLPSGQEIAVKRLSKSSGQGGAEFKNEVVVVAKLQHRNLARLLGFCLQGEEKILVYEYVANKSLDYTLFVLTLRFIMEGALIIRSLARRQANFGQ 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38536g00001 136 SUPERFAMILY Protein kinase-like (PK-like) 6 113 IPR011009 -
Trme38536g00001 136 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 112 - -
Trme38536g00001 136 ProSiteProfiles Protein kinase domain profile. 24 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme38536g00001 136 ProSitePatterns Protein kinases ATP-binding region signature. 30 52 IPR017441 GO:0005524
Trme38536g00001 136 Pfam Protein tyrosine and serine/threonine kinase 26 109 IPR001245 GO:0004672|GO:0006468
Trme38536g00001 136 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 1 99 - -
Trme38536g00001 136 Gene3D Phosphorylase Kinase; domain 1 2 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme38536g00001 Trme-Chr38536 93 712 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38536g00001 2 110 Receptor kinase-like Gene Family AT4G23130 77.064 9.52e-53 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme38536g00001 PK_Tyr_Ser-Thr 1.2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38536g00001 - - vun:114173511 198.364