Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38528g00001 ATGGGAAAGGTACCATTGCCATATATCTTTGGAGCATTTATTCCAGCAGTGATGATAGCAGGTTTATACTTTTTCGATCATAGTGTAGCTTCAAAGTTGGCTCAACAGAAGGACTTTAACCTTCAAAAACCATCTGCTTACCACTATGATATTTTTCTTCTTGGAATAATGACTTTTATTTGCGGTATTCTTGGTCTTCCTCCCGCAAATGGAGTCCTTCCTCAGTCCCCTATGCATACAAAGAGTTTAGCAATTCTCAGGAGGCAGATGATCCGAAAGAAGGTGGTGAAGAGTGCCAAGGAATGCATTAGGCAACAAGGAAGTACCTCTGAATTATACGGAACGATGCGAGCCGTGTTTATAGAAATGGATGCCGCACCTACCGTTAAAGAGTTGGAGTCTCTGAAGGAAGCTGTAATGAAAACTAATGAAAAGAGTGG 440 0.4136 MGKVPLPYIFGAFIPAVMIAGLYFFDHSVASKLAQQKDFNLQKPSAYHYDIFLLGIMTFICGILGLPPANGVLPQSPMHTKSLAILRRQMIRKKVVKSAKECIRQQGSTSELYGTMRAVFIEMDAAPTVKELESLKEAVMKTNEKSG 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38528g00001 147 Pfam HCO3- transporter family 2 90 IPR011531 GO:0006820|GO:0016020
Trme38528g00001 147 PANTHER ANION EXCHANGE PROTEIN 1 124 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme38528g00001 Trme-Chr38528 1 897 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38528g00001 1 145 Antiporters AT1G15460 68.421 7.27e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38528g00001 K24194 - cave:132189892 247.669