Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38526g00001 ATGGAACCACCAATGTACGGAAACTCTACGCCCTTGAACATCACCAGAGAAACTGAAGACGGTTCTGGTCCCGACTCCGCCATCGACGGTAACCATCACATTCATTTCGAAACTGTTGATGATGGCAGTGGCGGTTTTGTTGTTGAGGATGTTACCTCCGACGCCGTTTATGGCCACGGCGGTGGAAACTCTGAATTAGGTATTCAACGGTTTGATGATTCTGATCAACTTACGCTTTCTTTTCGTGGTCAAGTTTATGTTTTCGATTCTGTTACGCCTGATAAG 285 0.4632 MEPPMYGNSTPLNITRETEDGSGPDSAIDGNHHIHFETVDDGSGGFVVEDVTSDAVYGHGGGNSELGIQRFDDSDQLTLSFRGQVYVFDSVTPDK 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38526g00001 95 ProSiteProfiles Tify domain profile. 70 95 IPR010399 -
Trme38526g00001 95 PANTHER GATA TRANSCRIPTION FACTOR 28 29 95 IPR045280 GO:0006355
Trme38526g00001 95 Pfam tify domain 74 95 IPR010399 -
Trme38526g00001 95 MobiDBLite consensus disorder prediction 1 32 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38526g00001 5 95 Tify Gene Family AT1G51600 36.634 2.70e-08 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Trme38526g00001 tify 1.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38526g00001 - - pvu:PHAVU_008G182900g 114.005