Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38515g00001 ATGATTCTATCCAGCCTTCAGAACTTGGAGAGCTGTCTTTTTGTTCTCTTCCCTTATTTCTCGTACATGCTGTCTGAAGGCCTTGGTTTGTCCGGTATTGTATCAATATTATTCACAGGAATTGTCATGAAGCACTATGCGTATTCAAATTTGTCACAAAGTTCTCAAAGATTTGTCTCTGCTTTTTTTGAGTTGATATCATCATTAGCAGAAACATTTATATTTATATACATGGGCTTTGACATTGCTATGGAACAACATAGCTGGTCTCATGTTGGATTTATATTCTTCTCCATT 297 0.3569 MILSSLQNLESCLFVLFPYFSYMLSEGLGLSGIVSILFTGIVMKHYAYSNLSQSSQRFVSAFFELISSLAETFIFIYMGFDIAMEQHSWSHVGFIFFSI 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38515g00001 99 PANTHER SODIUM/HYDROGEN EXCHANGER 6 99 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Trme38515g00001 99 Pfam Sodium/hydrogen exchanger family 7 98 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme38515g00001 Trme-Chr38515 12 565 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38515g00001 8 92 Antiporters AT5G27150 44.706 5.58e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38515g00001 K14724 - gmx:100781280 185.652