Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38487g00001 TGGGGCAAACTGCCAGAAAATGTTCCCTGTCATCCAAAACTTGCAGACTTCGCTAACTGTATGAAGAAGAAAGGTCGTGGAATGACCATCTTTGTCTCTATACTAGACGGGGATTACCATGAATGTGCTGAAGAGGCCAAGACAGCTTGTAAACAACTTAGTACCTACATTGAGTACAAGAATTGTGAAGGTGTGGCCGAGATTGTTGTAGCTCCTAACATGTCTGATGGTTTTNNNNNNNNNNANNNNNNNNNNANNCTTGGTAATCTTAAGCCGAACATTGTGGTGATGCGTTATCCAGAAATCTGGCGCCGGGAGAACTTAACAGATATCCCTGCCACCTTTGTTGGTATAATTAATGACTGCATTGTTGCAAACAAGGCAGTAGTTATAGTGAAAGGTCTGGATGAATGGCCAAATGTGTACCAGAAGCAATACGGTACAATTGATTTGTATTGGATTGTAAGAGATGGYGGTCTCATGCTACTWCTCTCTCAATTRCTTCTTACCAAAGAGAGCTTTGAGAGTTGTAAGATTCAGGTTTTCTGTATTGCAGAAGAYGATGCAGATGCAGAGGGGCTAAAAGCTGATGTTAAAAAATTCCTTTACGATCTTCGGATGCAGGCAGAAGTATTTGTCATAACAATGAAATGGGAAGAACAAGCGGATAGCGGGTCTCCGCAAGATGAGTCATTAGACGCATTTACTAGTGCCAATCAAAGAATTGTTGATTATTTAACCCAAATGAAGGCAAGAGCAGAGAGAGAAGGTACCCCTCTTATGGCAGATGGTAAGACCGTGGTTGTGAACGAGAAGCAAGTCGAGAAGTTTTTATACACAACGCTTAAGCTGAATTCCATAATTTTGAGATACTCGAGAATGGCTGCTGTTGTGTTAGTAAGTCTTCCTCCCCCTCCATTGTGCCACCCAGCATATTTCTATATGGAGTATATGGATCTGTTGCTGGAGAATATACCAAGGATTTTGATTGTAAGAGGATATCGTAGAGATGTTGTAACTCTATTCACATAG 1032 0.4041 WGKLPENVPCHPKLADFANCMKKKGRGMTIFVSILDGDYHECAEEAKTACKQLSTYIEYKNCEGVAEIVVAPNMSDGFXXXXXXXXLGNLKPNIVVMRYPEIWRRENLTDIPATFVGIINDCIVANKAVVIVKGLDEWPNVYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEDDADAEGLKADVKKFLYDLRMQAEVFVITMKWEEQADSGSPQDESLDAFTSANQRIVDYLTQMKARAEREGTPLMADGKTVVVNEKQVEKFLYTTLKLNSIILRYSRMAAVVLVSLPPPPLCHPAYFYMEYMDLLLENIPRILIVRGYRRDVVTLFT 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38487g00001 343 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 7 340 IPR004842 GO:0006811|GO:0015377|GO:0016020
Trme38487g00001 343 Pfam Solute carrier family 12 144 342 IPR018491 GO:0006811|GO:0016020|GO:0022857
Trme38487g00001 343 Pfam Solute carrier family 12 12 133 IPR018491 GO:0006811|GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme38487g00001 Trme-Chr38487 1 1032 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38487g00001 1 343 Inorganic Solute Cotransporters AT1G30450 79.942 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38487g00001 K14427 - pvu:PHAVU_009G216800g 597.045