Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38486g00001 CCTGAGCTTCAGCCATTTGATGCAAATGGCACAAGCGAGAATATCATTGAGCAGCCACTAATGCAAGAGACATTCTCAAGGGTGGAGAGAGTGGAGAAAGCAAGATATGTGGGGATATCAGGTGATGGATACCGATGGCACAAGGTTGGAGGGAAAATTGTGAAGGGTAACCCACACCCCAG 182 0.4835 PELQPFDANGTSENIIEQPLMQETFSRVERVEKARYVGISGDGYRWHKVGGKIVKGNPHP 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38486g00001 60 ProSiteProfiles WRKY domain profile. 35 60 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trme38486g00001 60 SUPERFAMILY WRKY DNA-binding domain 37 60 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trme38486g00001 60 Gene3D WRKY domain 27 60 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme38486g00001 Trme-Chr38486 34 449 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38486g00001 9 60 WRKY Transcription Factor Family AT4G30935 48.077 2.83e-09 48.9