Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38445g00001 ATGTCCACATTTCTACAGAGTTCTCTTTCACATGAGATCTTCTCTTCATTCCCTATGTTTTTCTTCACTATCTTTCCACTATTCCTTTCTCTTTTCTTCATCATCAAATGGTATTTCAACAATTCTGTCACCACAAGAAACTCACCACCTTCACCTCCAAGATTTCCTCTACTCGGTAATCTCCATCAACTTGGCTTATTCCCTCACCGATCACTCCAAAAAATTTCTCACAAATATGGCCCTATAATGCTTCTTTATTTTGGGAAGGTTCCGGTACTTGTGGTTTCTTCTGCTGATGCAGCTAGTAAAGTAATGAAAACTCATGACTTGGTTTTCTCTGATAGGCCACAACGTAAAATCTTCGATATCCTTTTATATGGTTCCAAAGATGTGGCAAGTTGTGKATACGGTGAATATTGGAGACAAGTAAGGAGTCTCAGTGTGTTACACCTTCTTAGTAACAAAAGGGTTAGATCTTATCGTCATGTGAGAGAGGAAGAAACATTAAGAATGATGGAATATATTACGGAGTGTTGTTCTTCTGCGTCTCCGTTGAATTTAACTGAGTTGTGTTCTACAATTACTAATGATGTAGTATGTAGGGTGGCTTTTGGAAAAAAATACCGTGAAGGGAGAGGAAAGAAATTGCATGAGGTGTTGATGGTGTTTGAGGAGTTATTGGGTAGTATATGTATAGGAGACTATTTACCTTGGCTTGATTGGTTGGGGAAAGTTAATGGTTTTTATAGCAAGGCAGAAAAATGTGCCAAATATTTGGATGAGTTCATAGAACAAGTCATTGAGGAGCACATTAGTCGTTGGTCTGATGGAGATGTTA 838 0.3807 MSTFLQSSLSHEIFSSFPMFFFTIFPLFLSLFFIIKWYFNNSVTTRNSPPSPPRFPLLGNLHQLGLFPHRSLQKISHKYGPIMLLYFGKVPVLVVSSADAASKVMKTHDLVFSDRPQRKIFDILLYGSKDVASCXYGEYWRQVRSLSVLHLLSNKRVRSYRHVREEETLRMMEYITECCSSASPLNLTELCSTITNDVVCRVAFGKKYREGRGKKLHEVLMVFEELLGSICIGDYLPWLDWLGKVNGFYSKAEKCAKYLDEFIEQVIEEHISRWSDGDV 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38445g00001 279 Gene3D Cytochrome P450 42 279 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme38445g00001 279 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 24 273 - -
Trme38445g00001 279 Pfam Cytochrome P450 49 276 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme38445g00001 279 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme38445g00001 279 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme38445g00001 279 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme38445g00001 279 SUPERFAMILY Cytochrome P450 49 278 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme38445g00001 Trme-Chr38445 1 838 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38445g00001 50 278 Cytochrome P450 AT3G48300 53.275 3.24e-82 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38445g00001 - - gmx:100819183 360.918