Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38422g00001 TTGTCTGGTATTATGAAGTGTTTTCCATTCCACTCTGGAGATAATAAGAAAGATGAACCNNNNNNNNNNANNNNNGCGTCGGGCCGTTCAGAAAGTTCCACATATGTTGATGCTGAAGGTAAAAGGTATAGTTCTGAATTGAATTCTCAGGATGTCTCGGATAGTGGCAGCGTGGATTCCCTCAGGAGGAACGCGCCTCCCAATATGTCCCAAAGACCTAGCAACCTTAGAGTGTTTACTGTATCTGAACTGAAATCAGCCACAAAGAATTTCAGTCGGTCTGTTATGCTTGGAGAAGGCGGGTTCGGTTGTGTCTATCAGGGTGTAATTAGAAGTGTAGATGACCCATCTAAAAGAATTGAGGTTGCAGTTAAACAACTTAGTAAAAGAGGAGTGCAGATTGTAGACATATTTCCTGTTGTAGTATGGCTCATATTTACTGATAAGCGGGCAAACACTCAAGCATATTTGCTGATAAGCGGGCAAACACTCAAGCATATTGAGATTGCATGCCATTTGGACTTATCCGTTTGTCGGGTTGCAATGAGGAAGTTGGAGGGTGCGGGTGGTGAACCTCCCCGTAGAGTTCAAAGATAA 597 0.4238 MSGIMKCFPFHSGDNKKDEPXXXXXASGRSESSTYVDAEGKRYSSELNSQDVSDSGSVDSLRRNAPPNMSQRPSNLRVFTVSELKSATKNFSRSVMLGEGGFGCVYQGVIRSVDDPSKRIEVAVKQLSKRGVQIVDIFPVVVWLIFTDKRANTQAYLLISGQTLKHIEIACHLDLSVCRVAMRKLEGAGGEPPRRVQR 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38422g00001 198 MobiDBLite consensus disorder prediction 8 73 - -
Trme38422g00001 198 MobiDBLite consensus disorder prediction 27 73 - -
Trme38422g00001 198 SUPERFAMILY Protein kinase-like (PK-like) 62 133 IPR011009 -
Trme38422g00001 198 ProSitePatterns Protein kinases ATP-binding region signature. 97 125 IPR017441 GO:0005524
Trme38422g00001 198 Gene3D Phosphorylase Kinase; domain 1 62 139 - -
Trme38422g00001 198 PANTHER OS01G0588500 PROTEIN-RELATED 50 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme38422g00001 Trme-Chr38422 189 1014 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38422g00001 78 133 Trihelix Transcription Factor Family AT1G68690 50.000 1.61e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38422g00001 - - gmx:100813060 169.474