Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme383g00001 ATGATATCTCCCTTAGAAACCCCTGTCAGTGATTCACCTGTCATTCATCAAGATATAATCTTTAAGCAAAGGCCTTTATCTGGTGTGATCAAAAAAATATCTCGTGTGATAAAAAAAATATCTCCGGTAGAAATTTATTTACCTTCAAAAGATGTCATTGAGGAACATACGGTCTGGAACATATGCCAGCCTCCTGATGATCCGGGGTATGCGGCTCCATCTTGTGTGAAAGGGAAAGGATCTCCCTTAGAAATTCATTTACCTTCAGAAGATGTCATTGAGGAACATATGGTCTGTAACAAATGGCAGCCTCCTGATGATACTGTATGTGCAGCTTTATCTCCGGTAGAAATCCCTATATGTTCGAAAGTAGTACAAAGTTCTGCACAAATCACCACAACACAGATGAAGTACGTTGTGGAGGCTCCTCCATACATGGATGAAGCTGATATTGTGGGCTTTGAAGCTCCAAGTGCTAAATTAGTCGATTGGTTGCTAAAGGAACAAGAAGAGTGCACTTTCGTCTGTGTGGTAGGAATGGACGGGCTAGGAAAAACCACCCTTGCCATAAAAGTTTTTTCCAACAAGGAGGTGATTACACACTTTGATTGTCGTGTATGGATCACAGTATCTCGATCATACAAGATAGAAGAATTGTTGAGGAAGTTGTTGTACAATATTTCCAAAGAAAATGGGGACATTTCTCCTAGCCATATTTCTAATATGGATCAACCTTCATTGATTATGGAAGTGAGACTCCGTTTGAGTCAAAAGAGGTATGTTGTCTTCTTTGACGATGTATGGGATACAGATTTTTGGTTCCAGATTGGATTTCTTAATGATATAAATGGAAGTAGGATATTTATCACTACAATGAACATGGATGTTGCGGTGTATTGTAAAAGATCTTCATGTGCTGAAGTGCATGAGATTCAACCTTTAAATCTTGCAAATTCGTTGGAGCTATTCAATAAGAAGGCATTCTTTGATTTTGGGGGAAATTGTCCACAAAATCTCAAAGATGTCTGTTTMGAAATTGTTAAAAAGTGCAAGGGTTTACCACTAACAATTGTGGCCATTGGCGGTGCTTTATCTGTCAAAGAGAAAAGTGAATCTGAATGGAAAAGGTTCAGTGAAAATCTTCATTCAGAAATGATACAGAGTCCCGATGTATCTGCTATAACACAAGTTTTTTGTTTTGATTATGATAATTTGCCTTCATTTCTCAAACCATGCCTATTGTATTTATCAATATATCCCGAAGATTATGAGATTAAATCAAGGAGATTGATTCAACATTGGATAGCGGAAGGTTTTATCAAACAAAAAAGTGGGACGACTTTAGAGCAAGTTGCTGAAGAATATTTACAAGAGTTGATCAACACACGTCAAGTGCAAAAATCTTCTGTTAGCATTGACGGTAAAGTTAAAGGTGTTCGCATTTACGACCTATTTTTTGTCCTACTCCGAGAAAAAGCTAGGGATTTTAGCTTTTGTAAGTTTGTTACTGATCATGATAGGTCATTGCATGGGATAATTCGAAGGCTATCAATAGCAACCACTTCCAATGATTTACTAGAAAATATTGAAAGCTCACATGTTCGGTCATTGCTTTTTTTCACAGAGGGAGAATTACCTGAATATCTTGTGAGGACAATCTCTACAAAATACAAGCTAGTAAAGGTACTAGATTTTGAAAGTTCTGGATTGCTTCATGTTCCTGAAAATTTAGGAGATTTAATTCACTTGAGGTATTTAAGCTTCAGGAATACACAACTGCAAAGTCTTCCAAAATCTATTGGTGAGCTTCAGAACTTGGAAACCTTGGATATAAGACAGACAGATGTAAATGAGTTGCCAAAGGAGATTAGTAAGCTTATAAAGCTACGGCATCTTCTCGGTAGCAAAATGTCTTTGATTAATTTGAAGAGTGGTATAGGAGGCATGGAATTCCTACAAACACTTAGTGATGTGAGAATAGATGAGGATGAAATAGAGCTGATTACAGAGCTGGGAAAGCTGACACAGTTAAAGAAGTTGAGCTTGTTTGATGTGAGGGAAGGACAGGGAATTGCTCTATGTTCCTCCATAAATGAGATGCAAGACTTGGAGAAGCTATACATTGAAGCAAAATCCAAAGATGCAGCCTTAGATTTGAGTTTTGTCTCCTGCCCACCTTTGCTTCGAAAGCTTCGCCTAAAAGCAAAGTTAAACAAGTTGCCAGAGTGGATTCTAAAGCTCGAGAACCTTGTCGAGTTGAGCATGTCATACTCCCTGTTAACTGAAGATCCATTGGAATCACTACAAGACTTACCAAATCTATTGCTGCTCAATCTCGCAGTTCGTTCATATGAAGGTGAAATTTTGCATTTTCAAGATGGAGGGTTTCAGAATCTAAAGGAACTAGACCTCAGATACTTATCTAACGTGGAATCCGTCATTATTGAAAAAGGAGCACTGCCTTCTTTAAAGGAGCTCACATTCATGAATATCCCCAACCTCAAGACGGTACCCTCTGCAATCGACTACTTGGAGAATCTTGAAGTTCTCAAAACTCGTTTCATGCCAACTGAATTTGTGAAAAGCATTGCTCCTTTGGCAAAACTTATCAAGGAAAAAAATGAGAGAAGGTATTAA 2637 0.3796 MISPLETPVSDSPVIHQDIIFKQRPLSGVIKKISRVIKKISPVEIYLPSKDVIEEHTVWNICQPPDDPGYAAPSCVKGKGSPLEIHLPSEDVIEEHMVCNKWQPPDDTVCAALSPVEIPICSKVVQSSAQITTTQMKYVVEAPPYMDEADIVGFEAPSAKLVDWLLKEQEECTFVCVVGMDGLGKTTLAIKVFSNKEVITHFDCRVWITVSRSYKIEELLRKLLYNISKENGDISPSHISNMDQPSLIMEVRLRLSQKRYVVFFDDVWDTDFWFQIGFLNDINGSRIFITTMNMDVAVYCKRSSCAEVHEIQPLNLANSLELFNKKAFFDFGGNCPQNLKDVCXEIVKKCKGLPLTIVAIGGALSVKEKSESEWKRFSENLHSEMIQSPDVSAITQVFCFDYDNLPSFLKPCLLYLSIYPEDYEIKSRRLIQHWIAEGFIKQKSGTTLEQVAEEYLQELINTRQVQKSSVSIDGKVKGVRIYDLFFVLLREKARDFSFCKFVTDHDRSLHGIIRRLSIATTSNDLLENIESSHVRSLLFFTEGELPEYLVRTISTKYKLVKVLDFESSGLLHVPENLGDLIHLRYLSFRNTQLQSLPKSIGELQNLETLDIRQTDVNELPKEISKLIKLRHLLGSKMSLINLKSGIGGMEFLQTLSDVRIDEDEIELITELGKLTQLKKLSLFDVREGQGIALCSSINEMQDLEKLYIEAKSKDAALDLSFVSCPPLLRKLRLKAKLNKLPEWILKLENLVELSMSYSLLTEDPLESLQDLPNLLLLNLAVRSYEGEILHFQDGGFQNLKELDLRYLSNVESVIIEKGALPSLKELTFMNIPNLKTVPSAIDYLENLEVLKTRFMPTEFVKSIAPLAKLIKEKNERRY 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme383g00001 878 Gene3D - 404 493 IPR036388 -
Trme383g00001 878 Pfam NB-ARC domain 158 391 IPR002182 GO:0043531
Trme383g00001 878 Gene3D - 314 403 IPR042197 -
Trme383g00001 878 Gene3D Ribonuclease Inhibitor 520 871 IPR032675 -
Trme383g00001 878 FunFam Probable disease resistance protein At1g63360 402 491 - -
Trme383g00001 878 Gene3D - 128 306 IPR027417 -
Trme383g00001 878 PRINTS Disease resistance protein signature 174 189 - -
Trme383g00001 878 PRINTS Disease resistance protein signature 794 810 - -
Trme383g00001 878 PRINTS Disease resistance protein signature 254 268 - -
Trme383g00001 878 PRINTS Disease resistance protein signature 350 364 - -
Trme383g00001 878 FunFam Probable disease resistance protein At1g61300 133 304 - -
Trme383g00001 878 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 416 IPR027417 -
Trme383g00001 878 PANTHER DISEASE RESISTANCE PROTEIN RP 146 820 IPR044974 GO:0006952
Trme383g00001 878 SUPERFAMILY L domain-like 530 870 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme383g00001 Trme-Chr383 194 3028 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme383g00001 101 383 WRKY Transcription Factor Family AT4G12020 24.915 1.69e-08 56.6