Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38317g00001 AGTTATTGTTCCTTCTATGGGAAGAAGGTGGACCCCGAGCCAGGAAGATGTAGGAGGACTGATGGAAAAAAGTGGAGGTGCTCCAAGGAAGCATACCCAGACTCCAAGTACTGTGAGCGCCACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAAACTATGGCACAGTCGTCATCCACTGTGACATCTCTGACTGTCGCTGGTGGCGGCAGCAGAGCTGGAAACTTCCAGAACCTTCCCACAACAAATGCCTTTGGTAGTCTTCAAAATACTACTGCTTCTGGAACTGACCGTGCCGATTATCATCTTGATACCATTCCCTATGGGATTCCAAGTAAAGAATACAG 359 0.493 SYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQTMAQSSSTVTSLTVAGGGSRAGNFQNLPTTNAFGSLQNTTASGTDRADYHLDTIPYGIPSKEY 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38317g00001 119 MobiDBLite consensus disorder prediction 52 102 - -
Trme38317g00001 119 Pfam WRC 12 54 IPR014977 -
Trme38317g00001 119 PANTHER GROWTH-REGULATING FACTOR 5 3 87 IPR031137 GO:0005634|GO:0006351|GO:0032502
Trme38317g00001 119 MobiDBLite consensus disorder prediction 41 119 - -
Trme38317g00001 119 ProSiteProfiles WRC domain profile. 11 55 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme38317g00001 Trme-Chr38317 36 394 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38317g00001 2 77 GRF Transcription Factor Family AT4G37740 58.333 1.54e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38317g00001 - - gmx:100787226 212.231