Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme383147g00001 ATGAGTGGAAGAGGTGGACCTTTGAGTGCTGAACCGGAACTTAAATTGACGACATTGACAAAAGATGACGAGTTTTTGATAATTGGAAGTGATGGAATATGGGATGTTTTTCGAAGCCAAAATGCCGTAGATTTTGCTAGGAGGAAGCTTCAACAGCATAATGATGTGAAACAATGTTGCAAGGAAATAATAGGAGAAGCAATAAAGAGAGGAGCAACAGATAATTTAACTGTTGTAATG 240 0.3792 MSGRGGPLSAEPELKLTTLTKDDEFLIIGSDGIWDVFRSQNAVDFARRKLQQHNDVKQCCKEIIGEAIKRGATDNLTVVM 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme383147g00001 80 Pfam Protein phosphatase 2C 7 75 IPR001932 -
Trme383147g00001 80 PANTHER PROTEIN PHOSPHATASE 2C 7 79 IPR015655 GO:0004722|GO:0006470
Trme383147g00001 80 ProSiteProfiles PPM-type phosphatase domain profile. 1 80 IPR001932 -
Trme383147g00001 80 SUPERFAMILY PP2C-like 7 79 IPR036457 -
Trme383147g00001 80 Gene3D - 2 80 IPR036457 -
Trme383147g00001 80 CDD PP2Cc 7 79 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme383147g00001 Trme-Chr383147 34 273 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme383147g00001 6 80 PP2C-type Phosphatase Gene Family AT2G25620 66.667 1.47e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme383147g00001 K14803 - gmx:100782648 155.606