Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38265g00001 ATGCGTCTAAGGAAGAATTTTTCTCAATATTACCATTCCCTTTTGTGCAGAAATGCATATGGACATATTTCTCGCAAGATAGATGTATATGCTTTTGGAGTTGTTATGTACGAACTAATTTCTGCTAAAGCAGCTGTGGTCAAAATCGATAAACCTAGTACCGAGTTCAAGAGCCTTGAGATTAGGACCAATGATTCTGTTGATGAATACAAGAGCCTTGTAGCTTTGTTTGATGAAGTTATTGATCAAGAGGTAGATCCTATGGAAGGTCTAAGAAAGCTGGTGGATCCAAGGCTAGGATATAGCTATTCAATTGATTCCATTAACAAGATGGCACAGCTTGCTAAGGCTTGCATAAATCGAGATCCGAAACGACGTCCAAGAATGGGAGATATTGTGGTTTCTCTTATGAAACTAAATTATACTATTGATGATGGAAGTAGGATAGATATTGCAGCGTTGAGTCTGGACTAA 474 0.3797 MRLRKNFSQYYHSLLCRNAYGHISRKIDVYAFGVVMYELISAKAAVVKIDKPSTEFKSLEIRTNDSVDEYKSLVALFDEVIDQEVDPMEGLRKLVDPRLGYSYSIDSINKMAQLAKACINRDPKRRPRMGDIVVSLMKLNYTIDDGSRIDIAALSLD 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38265g00001 157 Gene3D Transferase(Phosphotransferase) domain 1 9 150 - -
Trme38265g00001 157 SUPERFAMILY Protein kinase-like (PK-like) 21 135 IPR011009 -
Trme38265g00001 157 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 19 144 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme38265g00001 Trme-Chr38265 373 1002 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38265g00001 20 154 Receptor kinase-like Gene Family AT3G21630 44.286 1.09e-29 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Trme38265g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38265g00001 - K13429 vvo:131616003 211.46