Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38257g00001 ATGGAGCAGCAGACAATAAGTGTTGCCAAGGCTGGTCTTGTAACAACCCTCAGTACCAAAACAACAGTATTTGGTGCCACAAATCCTAAGGGGCATTATGATCCTGATCAAC 112 0.4464 MEQQTISVAKAGLVTTLSTKTTVFGATNPKGHYDPDQ 37
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38257g00001 37 ProSiteProfiles MCM family domain profile. 1 37 IPR001208 GO:0003677|GO:0005524|GO:0032508
Trme38257g00001 37 Pfam MCM P-loop domain 1 36 IPR001208 GO:0003677|GO:0005524|GO:0032508
Trme38257g00001 37 Gene3D - 1 37 IPR027417 -
Trme38257g00001 37 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 1 36 IPR031327 GO:0003677|GO:0005524|GO:0032508
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38257g00001 1 37 Core DNA Replication Machinery Family AT2G14050 91.892 4.94e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38257g00001 K10738 - qsa:O6P43_012385 75.485