Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38224g00001 ATGCAGGCAATATTTAGAATTGGAAAAGGTGAGCCACCTCCTATTCCTGACACTCTTTCAAGAGATGCAAAGGATTTTATCTTGCAGTGCCTTCAAGTTAATCCCGATAATCGTCCTACTGCTGCTCAACTCTTAAACCATCCATTTGTCCAAAGGCCACTTTTCCAGTCTTCATCTCCTTACGTTCATGGCAGAGGAGGTTAA 204 0.4265 MQAIFRIGKGEPPPIPDTLSRDAKDFILQCLQVNPDNRPTAAQLLNHPFVQRPLFQSSSPYVHGRGG 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38224g00001 67 Gene3D Transferase(Phosphotransferase) domain 1 1 61 - -
Trme38224g00001 67 ProSiteProfiles Protein kinase domain profile. 1 50 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme38224g00001 67 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 2 59 - -
Trme38224g00001 67 SUPERFAMILY Protein kinase-like (PK-like) 3 57 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme38224g00001 Trme-Chr38224 548 751 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38224g00001 1 54 MAP Kinase Kinase Kinase AT4G08500 70.370 2.04e-22 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Trme38224g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38224g00001 K13414 - gmx:100819999 113.62