Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38190g00001 ATGTTAGAAAATACATTTAGAGGAAGCTCTGAAATAAAACATAGGCTTGCCCACAAAAAGGTTCTTCTATTTCTAGACGACGTTGATTCAACAAAGCAATTAGAAGAGCTAGCTGGAGGATGTGATTGGTTTGGTTCCGGTAGCAGGATCATCGTAACAACAAGGGACAAATCATTGGTAGATATGCATGTGATGGATGGTGTTATTGTTGAAAAATATAAAATGGAAGAGCTGAATGATCATGACTCTCAGGAACTCTTTTGTTGGCATGCCTTCAAGACGAGTAATCCCGCAAAAAACTTTGAAGGTCTTTCTATGCTTGCCGTGAGTTATGCAAAGGGTGTTCCATTGGTTTTGAAAATACTGGGCTCCAATGTGGGGATTCAGAAGCCAGATGATTGGGCAATGATATTGGAGCGTAGTATCAGAAATACAAATGCGCGGAGTTCTTATGAAACTAAGGTCAAAGCTTGGGGTCGGGGGAATGCTTTTCCCTCCACTTATCACCCACCAAGGGAACAATGCAACAATGAAAGGTATGAACCTGAGCTTATCACAAAGATTGCTAAAGACACATTATCTAATCTATCTGTCCCTTTACCCATGAAACACATAATTGGACTTGATTCTCGTTTTGAAATG 642 0.4019 MLENTFRGSSEIKHRLAHKKVLLFLDDVDSTKQLEELAGGCDWFGSGSRIIVTTRDKSLVDMHVMDGVIVEKYKMEELNDHDSQELFCWHAFKTSNPAKNFEGLSMLAVSYAKGVPLVLKILGSNVGIQKPDDWAMILERSIRNTNARSSYETKVKAWGRGNAFPSTYHPPREQCNNERYEPELITKIAKDTLSNLSVPLPMKHIIGLDSRFEM 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38190g00001 214 Gene3D - 77 155 IPR042197 -
Trme38190g00001 214 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 152 IPR044974 GO:0006952
Trme38190g00001 214 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 144 IPR027417 -
Trme38190g00001 214 PRINTS Disease resistance protein signature 15 29 - -
Trme38190g00001 214 PRINTS Disease resistance protein signature 112 126 - -
Trme38190g00001 214 Gene3D - 3 66 IPR027417 -
Trme38190g00001 214 Pfam NB-ARC domain 10 139 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme38190g00001 Trme-Chr38190 67 1029 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38190g00001 10 153 WRKY Transcription Factor Family AT5G45050 31.788 3.30e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38190g00001 - - tpra:123920924 202.601