Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38165g00001 GTTCTCAGAGATGGTCGATGGAGTGAAGAAGATGCTGCAATTTTGGTCCCAGGTGACATAATTAGCATTAAATTAGGCGATATCATTCCTGCTGATGCTCGTCTCCTTGAGGGTGATGCTTTGAGTGTTGATCAGTCTGCTTTAACCGGAGAATCTCTTCCGGCGACAAAGAATCCCTCAGATGAAGTGTTTTCTGGTTCAACTGTTAAGAAAGGTGAGATTGAAGCAGTTGTTATTGCTACTGGAGTGCACACATTTTTCGGTAAAGCTGCTCACCTTGTTGACAGCACCAACCAAGTTGGTCACTTTCAGAAAGTCCTAACAGCAATTGTGACAAAACCGGGACTCTGA 351 0.4416 VLRDGRWSEEDAAILVPGDIISIKLGDIIPADARLLEGDALSVDQSALTGESLPATKNPSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIVTKPGL 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38165g00001 116 FunFam Plasma membrane ATPase 1 81 - -
Trme38165g00001 116 Pfam E1-E2 ATPase 1 110 - -
Trme38165g00001 116 Gene3D - 82 110 - -
Trme38165g00001 116 PANTHER CALCIUM-TRANSPORTING ATPASE 1 110 - -
Trme38165g00001 116 SUPERFAMILY Calcium ATPase, transduction domain A 1 94 IPR008250 -
Trme38165g00001 116 Gene3D - 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme38165g00001 Trme-Chr38165 29 632 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38165g00001 1 110 Primary Pumps ATPases AT5G57350 89.091 3.99e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38165g00001 K01535 - gmx:100785442 209.92