Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38150g00001 CAGAGGAAGAAGATGGAATGGTGGGCTTCACTTGATGAGGAGAAGGTTAAAGGGAAGAAGAATAGGAAACCAAGGGAATGGTGGAAGGAGGAGTTTTGTGAGGAGCTTTCAAAGAAGAGTAGGAAGAAAAANNNNNNNCTTGATTGTCGTGGCGGAGGCGGTGGTGGGGAATCGTGGTGGCAGAGAGACGAGGATGTAGGTGGCGCGACAGTGGAGAAGAAGAAAAAGAGGAAAAGTAAGAGTAGTAGAGGGAGTATTGATTGGTGGTTGGATGGATTAAGTGGTGAGATTAGGAATAATGGAAGAAGAAATAGTCAAGATTGGGGTAATGGTGATGTACCAAAGAGTGGTGGAATNNNNNNNNNNANNNNNNNNNNANNNNNNNTTTGTTACATTGCTCCTGAATATGGTGGTGGTGGACAATTATCTGAGAAATGTGATGTGTATAGTTTTGGTGTTCTTCTTTTGGTTTTGGTTGCTGGAAGAAGACCACTTCAAGTAACAGCATCACCAATTTCAGAATTTGAGAGAGCAAATCTAATTTCATGGGCTAGACAACTTGCTCATAATGGGAAACTTTTGGATCTTGTTGATAGTTCTATTCATTCTTTGGATAAAGAACAAGCATTGCTTTGCATCACCATTGCATTGTTGTGTTTGCAGAGATCACCTGGTAAAAGACCTTCCATGAAAGAGATTGTTGGAATGCTTTCTGGTGAGGCTGACCCTCCTCATTTACCTTTTGAATTCTCACCTTCACCACCCTCTAATTTCCCTTTCAAATCAAGAAAAAAGGCTAGTGGTGTTGGCTTGAAATCTTGGAGTTTGCTCCTCTCACGGTCTCATGTTCGATCGGTGGACTAG 864 0.4062 QRKKMEWWASLDEEKVKGKKNRKPREWWKEEFCEELSKKSRKKXXXLDCRGGGGGGESWWQRDEDVGGATVEKKKKRKSKSSRGSIDWWLDGLSGEIRNNGRRNSQDWGNGDVPKSGGXXXXXXXXXXXCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHNGKLLDLVDSSIHSLDKEQALLCITIALLCLQRSPGKRPSMKEIVGMLSGEADPPHLPFEFSPSPPSNFPFKSRKKASGVGLKSWSLLLSRSHVRSVD 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38150g00001 287 PANTHER OS07G0586332 PROTEIN 2 266 IPR044576 -
Trme38150g00001 287 ProSiteProfiles Protein kinase domain profile. 1 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme38150g00001 287 Pfam Protein tyrosine and serine/threonine kinase 129 236 IPR001245 GO:0004672|GO:0006468
Trme38150g00001 287 Gene3D Transferase(Phosphotransferase) domain 1 92 243 - -
Trme38150g00001 287 SUPERFAMILY Protein kinase-like (PK-like) 129 256 IPR011009 -
Trme38150g00001 287 MobiDBLite consensus disorder prediction 100 120 - -
Trme38150g00001 287 MobiDBLite consensus disorder prediction 44 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme38150g00001 Trme-Chr38150 1 953 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38150g00001 131 265 Receptor kinase-like Gene Family AT4G23320 36.957 3.03e-21 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Trme38150g00001 PK_Tyr_Ser-Thr 3.1e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38150g00001 - - gmx:100814933 366.311