Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38132g00001 ATGATACAAGTCAAGCAGGAGCTTGAAGAAGCTGATGAGGTTTTAACTGATGGTAAAAAGAATGATAGGGTTAGGATGAAAATGGGAGGGAAGGGCAAGAAGAAATTGAAACGGAAGCGTGGGAGGCCTCCCAAAACAGAAATAAAAGAGAAAGACCAATTAGATGATCAGCCACCGCGTAAGCTTGGGAGGCCTCCGAAAACAGAGATAAAAGAGAAAGATCAATTAGATGATCAGCCACCGCGTAAGCTTAGGAGGCCTTGCAGAACAGAGTTAAAAGAGGATGATCAGTCACCGCGTAAGCTTGGGAGGCCTCGCAAAACAGAGCTAAAAGAGGATGTTCAGTCACCGCGTAAGCTTGGGAGGCCTCTCAAAACAGAGTTAAAAGAGGATGTTCAGTCACCGCGTAAGCGTGGAAGACCCCCCAAGACCGAGCAACAAAAACATCTCATGACCCTGGCACATAATAGTAAAGGAAATGTGAGCCGCGAAGACGGTAAAAAAGTTGTAACTGTAACAGATAGTGCAAGTGAAAGTGAAGTTGATGATACACGCTCAAGGAGGTCTTCCGGTAAAAAGTTAAAAAAGAAAGGATTTTCTCCTGTAAGGAAAAATAAATTGCGAAAGGTTTTGAAAACTGAGAATGGTGGGATGGCATCAAATACTGTGAATGTACCTGTTGCTAAACAAAGTACAAGCCGTGAAGAAAAGAAGTTGGTGAGGGATAAAATAATGGAATGTCTCTCGGCTGCAGGATGGACTGTTGACCGTAGACCTAGAAACGGAAGAGATTATATTGATGCAGTATATGTTGCTCTGGACGGAAAAACACATTGGTCAATAACCTTGGCATACAAGAGGCTTAAAAAGCATTATGAAGCCGGGGACGGTGAAGGTAAGTTGTACAGACCAGGATTCAAATTTACACCAATATCGGAGGAAGATTTCAATTCATTAACTAGAGTAGTTACCAAGTCCAAGATAGGAAGTAAAGTTAAACGTGTGCCATTTGGAGGAAAGGGTGGAAAGA 1030 0.4272 MIQVKQELEEADEVLTDGKKNDRVRMKMGGKGKKKLKRKRGRPPKTEIKEKDQLDDQPPRKLGRPPKTEIKEKDQLDDQPPRKLRRPCRTELKEDDQSPRKLGRPRKTELKEDVQSPRKLGRPLKTELKEDVQSPRKRGRPPKTEQQKHLMTLAHNSKGNVSREDGKKVVTVTDSASESEVDDTRSRRSSGKKLKKKGFSPVRKNKLRKVLKTENGGMASNTVNVPVAKQSTSREEKKLVRDKIMECLSAAGWTVDRRPRNGRDYIDAVYVALDGKTHWSITLAYKRLKKHYEAGDGEGKLYRPGFKFTPISEEDFNSLTRVVTKSKIGSKVKRVPFGGKGGK 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38132g00001 343 PRINTS AT-hook-like domain signature 57 68 IPR017956 GO:0003677
Trme38132g00001 343 PRINTS AT-hook-like domain signature 37 47 IPR017956 GO:0003677
Trme38132g00001 343 PRINTS AT-hook-like domain signature 133 143 IPR017956 GO:0003677
Trme38132g00001 343 SMART AT_hook_2 135 147 IPR017956 GO:0003677
Trme38132g00001 343 SMART AT_hook_2 59 71 IPR017956 GO:0003677
Trme38132g00001 343 SMART AT_hook_2 117 129 IPR017956 GO:0003677
Trme38132g00001 343 SMART AT_hook_2 99 111 IPR017956 GO:0003677
Trme38132g00001 343 SMART AT_hook_2 37 49 IPR017956 GO:0003677
Trme38132g00001 343 Pfam AT hook motif 59 68 IPR017956 GO:0003677
Trme38132g00001 343 Pfam AT hook motif 99 109 IPR017956 GO:0003677
Trme38132g00001 343 Pfam AT hook motif 37 46 IPR017956 GO:0003677
Trme38132g00001 343 Pfam AT hook motif 135 145 IPR017956 GO:0003677
Trme38132g00001 343 MobiDBLite consensus disorder prediction 26 42 - -
Trme38132g00001 343 MobiDBLite consensus disorder prediction 1 25 - -
Trme38132g00001 343 MobiDBLite consensus disorder prediction 43 145 - -
Trme38132g00001 343 MobiDBLite consensus disorder prediction 1 200 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38132g00001 94 325 PHD Transcription Factor Family AT5G36670 31.765 1.81e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38132g00001 - - tpra:123913713 612.838