Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38110g00001 GTTAGACTACTGCCCCATAATTTTGGTCTTAAAGCATCTAGGTTTTTGAGAAATGATAGATGTATGAGAGTGATGGCATCAAGGAACATGTCTCAATCTGCTACACAGGAAAATGCATTAGATTGGGTGAAGCAGGATAAGAGAAGAATGCTTCATGTCGTATATCGTGTTGGAGACTTGGACAAGAGTCTAAAATTTTATACTGAGGGCCTAGGAATGAAGGTGCTCAGGAAGCGCGACAGGACAGAGGAGAGATATATGAATGCCTTTCTTGGATATGGCCCTGAGGATTCACACTTCTCTATTGAACTAACATACAATTATGGGATTGAAACGTATGACATTGGAACCGGATTTGGCCATTTTGGTATTGCTATGGATGATGTTAGTTTCTCAAACTTTTATGCCTACTTGTCAATCTTTTGTGTGCCTACTATTCCCATCATCATTCTATAA 456 0.3947 VRLLPHNFGLKASRFLRNDRCMRVMASRNMSQSATQENALDWVKQDKRRMLHVVYRVGDLDKSLKFYTEGLGMKVLRKRDRTEERYMNAFLGYGPEDSHFSIELTYNYGIETYDIGTGFGHFGIAMDDVSFSNFYAYLSIFCVPTIPIIIL 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38110g00001 151 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 49 151 IPR037523 -
Trme38110g00001 151 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 50 129 IPR004360 -
Trme38110g00001 151 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 48 129 IPR029068 -
Trme38110g00001 151 ProSitePatterns Glyoxalase I signature 2. 116 128 IPR018146 GO:0004462|GO:0046872
Trme38110g00001 151 Gene3D - 21 139 IPR029068 -
Trme38110g00001 151 PANTHER LACTOYLGLUTATHIONE LYASE 25 130 - -
Trme38110g00001 151 ProSitePatterns Glyoxalase I signature 1. 52 73 IPR018146 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme38110g00001 Trme-Chr38110 183 861 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38110g00001 50 129 Calmodulin-binding Proteins AT1G08110 32.381 1.54e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38110g00001 K01759 - gmx:100802155 208.379