Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38095g00001 ATGAATTATGTCACATTTGTTGTAAAGTTCTCTTTCAGATTATTGAACGAAAACCCAGTACAAAGATTAGGTGCAACAGGAGCTACGGAAGTTAAACGCCATGCTTTCTTCAAGGATATTAACTGGGATACGCTGGCAATGCAGAAGGCTATGTTCATACCATCGGCTGCTGAATCTCAAGATACAAGTTATTTTATGAGCCGCTACATTTGGAATCCAGAGGATGAACATTGTGCTGGAGCTAGTGATTTTGATGACATTACTGAAACATACAGCAGTGGTTCAGGAAGCGGCGATTCATTAGATGAAGATGGTGATGTCTGCGGGAGTTTAAGAGGGTTCAACAACAATGGTCCACCTCAAAATCTTGAGGTGCAGTACTCGTTTAGTAACTTCTCATTTAAG 405 0.4074 MNYVTFVVKFSFRLLNENPVQRLGATGATEVKRHAFFKDINWDTLAMQKAMFIPSAAESQDTSYFMSRYIWNPEDEHCAGASDFDDITETYSSGSGSGDSLDEDGDVCGSLRGFNNNGPPQNLEVQYSFSNFSFK 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38095g00001 135 ProSiteProfiles AGC-kinase C-terminal domain profile. 38 135 IPR000961 GO:0004674|GO:0005524|GO:0006468
Trme38095g00001 135 Gene3D Transferase(Phosphotransferase) domain 1 10 54 - -
Trme38095g00001 135 Gene3D Phosphorylase Kinase; domain 1 55 70 - -
Trme38095g00001 135 PANTHER SERINE/THREONINE-PROTEIN KINASE 12 133 - -
Trme38095g00001 135 SUPERFAMILY Protein kinase-like (PK-like) 8 71 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme38095g00001 Trme-Chr38095 22 1023 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38095g00001 13 135 AGC Kinase Gene Family AT5G62310 73.171 2.97e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38095g00001 - - gmx:100806311 187.193