Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38089g00001 GTATCAGCTTTTCAAGTTAGTGTAGGACAAGCTGGAACCTCGAACAAAACGGTTAGACTTCCGAAGAATTTCACTCTTTTAGCTCCAGGACCCGGATATACCTGTGGCCCTGCCAAGATTGTTCCTCCCACCAATTTTCTTACTCCTGATAGGCGCCGCAAGACTCAAGCTTTGATGACATGGAATGTTACGTGTACTTACTCGCAATTTCTAGCAAGAAAGAATCCGAGTTGTTGTCTATCTTTATCATCTTTCTACAATGAAACCATTACACCTTGTCCTCATTGTGCATGTGGCTGCCAAAACAAGAAAAACTGTGTGAAGAATGATGCTAAGATTCTGAGTATGGTAGGAGTTCACACTCCAAAGAAAGACAATGAACCATTGATGCAGTGCACTCATCATATGTGCCCAATTAGAGTTCACTGGCATGTGAAGAATAACTATAAGGACTATTGGCGAGTCAAAATCGCG 474 0.4219 VSAFQVSVGQAGTSNKTVRLPKNFTLLAPGPGYTCGPAKIVPPTNFLTPDRRRKTQALMTWNVTCTYSQFLARKNPSCCLSLSSFYNETITPCPHCACGCQNKKNCVKNDAKILSMVGVHTPKKDNEPLMQCTHHMCPIRVHWHVKNNYKDYWRVKIA 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38089g00001 158 PANTHER PROTEIN COBRA 1 158 IPR006918 GO:0010215|GO:0016020
Trme38089g00001 158 Pfam COBRA-like protein 1 68 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme38089g00001 Trme-Chr38089 302 1069 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38089g00001 1 158 COBRA Gene Family AT5G15630 82.278 1.72e-96 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38089g00001 - - gmx:100798678 322.783