Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme38080g00001 GGCAAACCTGGAGATTATCAAGATTTTGTTGGCATAATTATTTTGTTAATTATAAACTCTACCATAAGTTTCATAGAAGAAAACAATGCTGGTAATGCAGCTGCTGCCCTTATGGCAAGATTGGCTCCAAAAGCAAAGGTACTTCGTGACGGAAAATGGAACGAAGAAGACGCTTCAGTGTTGGTCCCTGGAGACATAGTTAGTATCAAGCTAGGTGACATTATTCCAGCCGACGCACGTCTCCTTGAAGGAGATCCTTTGAAGATTGATCAGGTAAAAGTCATAGAAGTATTCTAA 297 0.4007 GKPGDYQDFVGIIILLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWNEEDASVLVPGDIVSIKLGDIIPADARLLEGDPLKIDQVKVIEVF 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme38080g00001 98 Pfam E1-E2 ATPase 41 91 - -
Trme38080g00001 98 Gene3D - 5 42 - -
Trme38080g00001 98 Gene3D - 43 91 - -
Trme38080g00001 98 SUPERFAMILY Calcium ATPase, transduction domain A 43 91 IPR008250 -
Trme38080g00001 98 PANTHER CALCIUM-TRANSPORTING ATPASE 5 92 - -
Trme38080g00001 98 SUPERFAMILY Calcium ATPase, transmembrane domain M 4 43 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme38080g00001 Trme-Chr38080 640 1022 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme38080g00001 1 91 Primary Pumps ATPases AT3G47950 87.912 3.46e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme38080g00001 K01535 - psat:127079422 151.754