Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3799g00001 GAATTGATATTGTTGGATGAATGGCTTAGTATGTTTGGTATGAGAGCAAGGATAGCATTGGCTGAAAAAGGTATAAAGTATGAGTACAAGGAAGAAGATCTTGAGAAAAAGAGCCAAATGCTTTTGGAAATGAACCCAATTCACAAGAAGATTCCAGTTCTTATCCATAAGGGAAAACCCATTTGTGAGTCCATCATTATTGTTGAGTATATTGATGAGGTTTGGAATGATAGAGTTCCATTTCTGCCCTTAGATCCTTATCAGAGAGCTCAAGCTAAGTTTTGGGCTGATTTTGTCAACAAGAAGGTTGGTGATGTTGGGGGGAGGATATGGGCTGGAAAGAGAGATGAAATTGAAGTGGCAAAGAAGGAATTGATTGAAGGGTTAAAGGAATTGGAGAATGTCCTTGGAGACAAGCCTTATTTTGGTGGTGACACATTTGGGTTTGTTGACATTGCTTTGATCCCTTTCTATAGCTGGTTTTATACTTATGAACAATTAGGAAACTTCAAAGTGGAGGCAGAGTGTGATAAGTTGATTTCTTGGGCAAAGAGATGCAAGGAGAGGGAAAGTGTTTCCAAATCTGTTGCTGATGAGAAAGAGGCATATGAGTATGTTGTTAACTATAGGAAGAGGTTTCAATTGGATTGA 651 0.3856 ELILLDEWLSMFGMRARIALAEKGIKYEYKEEDLEKKSQMLLEMNPIHKKIPVLIHKGKPICESIIIVEYIDEVWNDRVPFLPLDPYQRAQAKFWADFVNKKVGDVGGRIWAGKRDEIEVAKKELIEGLKELENVLGDKPYFGGDTFGFVDIALIPFYSWFYTYEQLGNFKVEAECDKLISWAKRCKERESVSKSVADEKEAYEYVVNYRKRFQLD 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3799g00001 216 Gene3D Glutaredoxin 1 84 - -
Trme3799g00001 216 SUPERFAMILY Thioredoxin-like 4 102 IPR036249 -
Trme3799g00001 216 SFLD Main.3: Omega- and Tau-like 2 214 IPR045073 -
Trme3799g00001 216 FunFam Glutathione S-transferase U20 85 216 - -
Trme3799g00001 216 SFLD Main (cytGST) 2 214 - -
Trme3799g00001 216 Pfam Glutathione S-transferase, N-terminal domain 2 73 IPR004045 -
Trme3799g00001 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 79 IPR004045 -
Trme3799g00001 216 CDD GST_C_Tau 86 206 IPR045074 GO:0004364|GO:0006749
Trme3799g00001 216 SUPERFAMILY GST C-terminal domain-like 73 213 IPR036282 -
Trme3799g00001 216 Pfam Glutathione S-transferase, C-terminal domain 118 185 - -
Trme3799g00001 216 Coils Coil 115 135 - -
Trme3799g00001 216 CDD GST_N_Tau 2 75 - -
Trme3799g00001 216 FunFam Tau class glutathione S-transferase 1 84 - -
Trme3799g00001 216 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 202 IPR045073 -
Trme3799g00001 216 Gene3D - 85 216 - -
Trme3799g00001 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 85 209 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3799g00001 Trme-Chr3799 158 1512 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3799g00001 1 216 Glutathione S-transferase Gene Family AT1G17180 62.037 2.72e-97 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3799g00001 K00799 - mnt:21386513 309.686