Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37987g00001 GGCATGATGAACAATTGTTGGTTCAGGGTAAAAACAAACGTGTGCAGGCCCCACAGAAGTGAAATAGGCATAGTGTTTGAACATCCAACACAACCAGGTAACCAATCAGGTGGTTGGATGGCAAAAGAAAGACACTTAGAAAGATCACAAGACACCAATCCAACTCTCAAAAAGAGTGTCTCTTCTCCATTCATGAACACAACATCAAAAACATACTCCATTTCCGAAGTTAAAAAACATAAAACTCCTGATTCTGCTTGGATCATCGTCCACGGTAATGTATACGATTGCACTCGCTTCCTTAAAGACCATCCTGGCGGCTCCGATAGTATCCTCATCAATGCCGGTACTGATTGTACCGATGAATTTGAAGCTATCCACTCTGACAAAGCCAAAAAATTACTAGAAGAATATAGAATCGGCGAGCTTGTTACTACCGGTTACACTTCAGATTCATCCTCTCCAAATAACTCCATTCATGGAAATTCCGAATTCACCCATCTTGCCCCAATTAAAGAAATCATGGCTCTTAACCCACGTGAGAGAATCCCATGCAAACTCATTTCAAAAACATCAATTTCACATGATGTAAGACTCTTCCGTTTTGCATTACCCTCTGAAGATCAATTATTGGGATTACCCGTCGGGAAACACATTTTCTTATGTGTTACCGTCGAAGGAAAATTGATCATGCGAGCTTATACCCCAACGAGTAGCGTCGATGAAATTGGGTATTTTGATTTAGTTGTCAAAATTTACTTCAAAAATGTTCATCCCAAGTTTCCTAATGGTGGACTCATGTCTCAATATTTGGACTCACTTACCATTGGGTCCACATTGGAAGTAAAAGGCCCAGTGGGCCACATTGAATATCTTGGAAGAGGAAATTTTACGGTTCACGGGAAACAAAGGTTCGCCAAGAAGCTAACATTTTTAGCTGGTGGAAC 947 0.4076 GMMNNCWFRVKTNVCRPHRSEIGIVFEHPTQPGNQSGGWMAKERHLERSQDTNPTLKKSVSSPFMNTTSKTYSISEVKKHKTPDSAWIIVHGNVYDCTRFLKDHPGGSDSILINAGTDCTDEFEAIHSDKAKKLLEEYRIGELVTTGYTSDSSSPNNSIHGNSEFTHLAPIKEIMALNPRERIPCKLISKTSISHDVRLFRFALPSEDQLLGLPVGKHIFLCVTVEGKLIMRAYTPTSSVDEIGYFDLVVKIYFKNVHPKFPNGGLMSQYLDSLTIGSTLEVKGPVGHIEYLGRGNFTVHGKQRFAKKLTFLAGGT 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37987g00001 316 Gene3D Translation factors 172 286 - -
Trme37987g00001 316 Pfam Oxidoreductase FAD-binding domain 185 291 IPR008333 -
Trme37987g00001 316 PRINTS Cytochrome B5 signature 94 104 IPR001199 -
Trme37987g00001 316 PRINTS Cytochrome B5 signature 119 126 IPR001199 -
Trme37987g00001 316 PRINTS Cytochrome B5 signature 104 118 IPR001199 -
Trme37987g00001 316 PRINTS Cytochrome B5 signature 131 143 IPR001199 -
Trme37987g00001 316 SMART Cyt_b5_2 72 144 IPR001199 -
Trme37987g00001 316 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 100 107 IPR018506 GO:0020037
Trme37987g00001 316 PRINTS Cytochrome B5 reductase signature 211 222 - -
Trme37987g00001 316 PRINTS Cytochrome B5 reductase signature 277 291 - -
Trme37987g00001 316 PRINTS Cytochrome B5 reductase signature 310 316 - -
Trme37987g00001 316 PRINTS Cytochrome B5 reductase signature 232 239 - -
Trme37987g00001 316 FunFam NADH-cytochrome b5 reductase 171 286 - -
Trme37987g00001 316 SUPERFAMILY Riboflavin synthase domain-like 173 292 IPR017938 -
Trme37987g00001 316 FunFam Nitrate reductase 65 146 - -
Trme37987g00001 316 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 67 147 IPR036400 -
Trme37987g00001 316 Gene3D - 1 62 - -
Trme37987g00001 316 Pfam Cytochrome b5-like Heme/Steroid binding domain 75 143 IPR001199 -
Trme37987g00001 316 CDD cyt_b5_reduct_like 185 316 - -
Trme37987g00001 316 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 69 144 IPR001199 -
Trme37987g00001 316 PANTHER NADH-CYTOCHROME B5 REDUCTASE 54 316 IPR001834 GO:0016491
Trme37987g00001 316 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 180 292 IPR017927 GO:0016491
Trme37987g00001 316 Gene3D - 64 147 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37987g00001 Trme-Chr37987 125 1071 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37987g00001 65 145 NADPH P450 reductases AT5G48810 45.122 6.31e-21 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37987g00001 K10534 - gmx:100813471 564.303