Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37972g00001 ATGCAGGGATGTGACGGTTCAATTCTGCTCGATGACACATCAAGTTTTACCGGAGAGAAAACTGCCATTCCCAATAAAAATTCAGCGCGTGGATTTGAAGTGATCGACAAAATCAAGTCAGCAGTGGAGGAAGTGTGCCCAGGTGTAGTCTCATGTGCTGATATCCTTGCCGTCACCGCTAGAGATTCCGTTGAGATACTTGGTGGCCCAAGTTGGGATGTAAAACTTGGAAGAAGAGATGCTAGAACCACCAGTAAATCAGCTGCAAACAAAGACATCCCAGCACCCACTTCAAGCCTCAACCAACTCATCTCAAGATATAATGCCCTTGGTCTTTCCACCAAGGATTTGGTCGCATTGTCTG 364 0.4643 MQGCDGSILLDDTSSFTGEKTAIPNKNSARGFEVIDKIKSAVEEVCPGVVSCADILAVTARDSVEILGGPSWDVKLGRRDARTTSKSAANKDIPAPTSSLNQLISRYNALGLSTKDLVALS 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37972g00001 121 Gene3D - 1 110 - -
Trme37972g00001 121 ProSiteProfiles Plant heme peroxidase family profile. 1 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme37972g00001 121 Pfam Peroxidase 2 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme37972g00001 121 SUPERFAMILY Heme-dependent peroxidases 2 121 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme37972g00001 121 PRINTS Haem peroxidase superfamily signature 68 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme37972g00001 121 PRINTS Haem peroxidase superfamily signature 116 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme37972g00001 121 PRINTS Haem peroxidase superfamily signature 50 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme37972g00001 121 PANTHER PEROXIDASE 72-RELATED 2 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme37972g00001 121 PRINTS Plant peroxidase signature 49 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme37972g00001 121 PRINTS Plant peroxidase signature 30 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme37972g00001 121 PRINTS Plant peroxidase signature 68 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme37972g00001 121 PRINTS Plant peroxidase signature 115 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37972g00001 Trme-Chr37972 31 648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37972g00001 1 121 Peroxidase AT5G05340 76.033 2.11e-64 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37972g00001 K00430 - gmx:100791414 210.69