Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme379689g00001 ATGCCATTGGCTTTGGAAGTGTTTGGTTGCTTTCTGTTTGGTAAGAGAAGGGTGGAGGAATGGGAGGATGCTGTTGAGAAGCTGAAAACAATTCGGCCTGGGAGTCTTCATGATGTGTTGAAGATAAGTTATGATGGGTTGGATGAACAAGAAAAGTGTATATTCCTTGATATTGCTTGTTTCTTTGTTCAAATGGGAACGAAGCGCGATGATGTG 216 0.4213 MPLALEVFGCFLFGKRRVEEWEDAVEKLKTIRPGSLHDVLKISYDGLDEQEKCIFLDIACFFVQMGTKRDDV 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme379689g00001 72 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 58 IPR027417 -
Trme379689g00001 72 Gene3D - 1 55 IPR042197 -
Trme379689g00001 72 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 63 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme379689g00001 Trme-Chr379689 1 216 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme379689g00001 2 62 WRKY Transcription Factor Family AT5G45050 54.098 2.53e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme379689g00001 - - mtr:11408681 144.05