Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3792g00001 AAAGGATTCTTGGCGAAATATTCAAACATTAGTAGAACAATTGTTAACACGACACGTGACACAGTCGGTCATGGGACCCACACTTCGTCAATAGCAGCTGGAAGCAGAGTAGATGGTGCATCTTTCTTTGGTTTAGCAAATGGAACAGCAACAGGAATAGCTTCATTGTCTAGACTAGCAATTTACAAGGTTGGGTGGGGAACAAAGGAAGTTACACTTGTATCTGATGTAATAGCTGCAATTGATGCCGCAATATCAGATGGTGTTGATGTTCTTTCAATGTCATTTAGCTTTGACAATGTGCCTTTGTATGAAGATGGTATTGCTATAGGAACATTTGCAGCTATGGAAAAAGGTATTTTTGTGTCAACTGCAGCAGGTAATGCTGGACCTTCCTTTAAAACTGTAAACAATGGAATACCATGGGTGACAACTGTTGCTGCTGGTACTTTAGATCGCAAATTTCATGGAAATATTACACTTGGTAATGGAGTCTCACTCACTGGCATCTCTTGTTATTATGGTAAATTCTCCGCTAGCAATTTTCCAATTGTTTTCATGGGTATGTGTGACAATGTTAAAGAACTAATCAAAGTGAAGAGCAAGATTGTGGTTTGTGAAATTAAGAATGGAACTTTTCCTAACCTTGTTAAACCAACTAAGAATTTGGATGCAGCAAAAGTTGTGGGAAGTGTTCTCATAATAAACTCATTACAAATGGATGAATTTCAATTCTCAAGTGCGATCCCATTCCCATCTATCATTATTAACCGAAAACACGGAGAAATTGTAAAAGATTTCATCAACAGAACCTCTTACTCAAGTTCAATAGCAAAAATGTCTTTCAAGATAACATCTTTTGACGCTAAACCAACGCCTAGTGTGGATTATTATAGTTCAAGAGGGCCTTCAAAGAGTTGTCCATATGTTTTGAAACCCGACATTACCGGTCCTGGTACATCGATATTAGCAGCATGGCCCACAAATGTTCCTGTGTTTGATTTTGTATCTTATAATAAGTTTAATATTTTATCCGGAACGTCTATGGCATGCCCTCATATTGCTGGTGTCGCTGTGCTTTTAAAAGGCGCACACAGTGATTGGAGCCCTGCGGCTATTCGGTCGGCAATAATGACAACATCAGACATAATTGATAATACTAAGGAACACATCAAAGACATTGGAACACGTAACAAAGCAACACCTCTTGCATTGGGAGCYGGTCATGTTAATCCTAATAGAGCACTTGACCCTGGTCTTGTTTATGATGTTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTTAACTTCACACAAAAAAACATCACTGTCATTACAAGATCATCTGTTAATGATTGTTCTAAACCATCATTAGATCTCAATTACCCTTCTTTTATTGCTTTTTTCAATGCTGGAAACTCTTCAAAGACAACCCAACATTTTCACAGAACAGTTACGAATGTTGGTGAAGGACAAACAACTTATGTTGCTAGCATTACACCAATTAAAAGGTTTCGTATCAGCGTTATTCCAAATAAATTGGTGTTCAAGAAGAAGAACCAGAAGATAAGCTATAGGTTGAGCATTGAAGGTCCAAGAATTATACAAAAGGATAATGTAGTTTTTGGATATCTTACTTGGAAGGATGATAAGCATGTAGTCAGAAGTCCTATTGTTGTAACCACCCCCAGTTTTAATTTGTAG 1707 0.3749 KGFLAKYSNISRTIVNTTRDTVGHGTHTSSIAAGSRVDGASFFGLANGTATGIASLSRLAIYKVGWGTKEVTLVSDVIAAIDAAISDGVDVLSMSFSFDNVPLYEDGIAIGTFAAMEKGIFVSTAAGNAGPSFKTVNNGIPWVTTVAAGTLDRKFHGNITLGNGVSLTGISCYYGKFSASNFPIVFMGMCDNVKELIKVKSKIVVCEIKNGTFPNLVKPTKNLDAAKVVGSVLIINSLQMDEFQFSSAIPFPSIIINRKHGEIVKDFINRTSYSSSIAKMSFKITSFDAKPTPSVDYYSSRGPSKSCPYVLKPDITGPGTSILAAWPTNVPVFDFVSYNKFNILSGTSMACPHIAGVAVLLKGAHSDWSPAAIRSAIMTTSDIIDNTKEHIKDIGTRNKATPLALGAGHVNPNRALDPGLVYDVGVQDYVNLLCALNFTQKNITVITRSSVNDCSKPSLDLNYPSFIAFFNAGNSSKTTQHFHRTVTNVGEGQTTYVASITPIKRFRISVIPNKLVFKKKNQKISYRLSIEGPRIIQKDNVVFGYLTWKDDKHVVRSPIVVTTPSFNL 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3792g00001 568 CDD PA_subtilisin_like 158 272 - -
Trme3792g00001 568 SUPERFAMILY Subtilisin-like 14 420 IPR036852 GO:0004252|GO:0006508
Trme3792g00001 568 ProSitePatterns Serine proteases, subtilase family, serine active site. 346 356 IPR023828 -
Trme3792g00001 568 Gene3D Peptidase S8/S53 domain 10 429 IPR036852 GO:0004252|GO:0006508
Trme3792g00001 568 ProSiteProfiles Serine proteases, subtilase domain profile. 1 416 - -
Trme3792g00001 568 Pfam Subtilase family 17 387 IPR000209 GO:0006508|GO:0008236
Trme3792g00001 568 PRINTS Subtilisin serine protease family (S8) signature 345 361 IPR015500 -
Trme3792g00001 568 PRINTS Subtilisin serine protease family (S8) signature 20 33 IPR015500 -
Trme3792g00001 568 Gene3D - 433 564 - -
Trme3792g00001 568 Gene3D - 152 288 - -
Trme3792g00001 568 Pfam Fibronectin type-III domain 460 561 IPR041469 -
Trme3792g00001 568 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 13 561 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3792g00001 Trme-Chr3792 626 2332 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3792g00001 1 551 Subtilisin-like Serine Gene Family AT5G67090 42.014 1.22e-137 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3792g00001 - - gmx:100781249 724.931