Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37896g00001 ATGCAAGGTGTGATATCATCATTTGAACAAGCAGCAGGATATGGRGCAGCAAAATCATACACATCTCTTGCTTTAAAGACAATCTCAAAGCAATTTAGAAGTCTTAAAGATGCAATCTCTTCACAAATTAAGGCAACTAGCAAGACTTTGGGTGAAGATGATTGCTTAGGAGTTAAATTAGAAGGTTCTAGACTTAGGTTTGTCGATCACCATCTCCGACAACAACGGGCACTACAGCAACTTGGAATGATTCAGACCAATGCTTGGAGGCCTCAAAGAGGCTTGCCAGAGCGAGCTGTTTCCGTTCTACGTGCTTGGCTTTTTGAGCATTTTTTGCACCCGTAA 345 0.4174 MQGVISSFEQAAGYGAAKSYTSLALKTISKQFRSLKDAISSQIKATSKTLGEDDCLGVKLEGSRLRFVDHHLRQQRALQQLGMIQTNAWRPQRGLPERAVSVLRAWLFEHFLHP 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37896g00001 114 Gene3D - 95 114 - -
Trme37896g00001 114 Pfam Associated with HOX 1 40 IPR006563 -
Trme37896g00001 114 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37896g00001 Trme-Chr37896 268 612 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37896g00001 1 114 Homeobox Transcription Factor Family AT2G35940 80.672 3.51e-59 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37896g00001 - - vum:124842043 208.764