Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37878g00001 GTTGTAAAGGTCGCCGATTTTGGGGTTGCTAGAGTGAAAACTCAGTCCGGAGTTATGACAGCAGAAACTGGGACATATCGTTGGATGGCTCCTGAGGTTATAGAACACAAGCCATATGATCACAAGGCTGATGTATTTAGTTTTGGAGTTGTTTTATGGGAGTTGCTCACTGGGAAGGTATAG 183 0.4426 VVKVADFGVARVKTQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGVVLWELLTGKV 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37878g00001 60 SUPERFAMILY Protein kinase-like (PK-like) 2 59 IPR011009 -
Trme37878g00001 60 ProSiteProfiles Protein kinase domain profile. 1 60 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme37878g00001 60 Pfam Protein kinase domain 2 59 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme37878g00001 60 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 2 59 - -
Trme37878g00001 60 Gene3D Transferase(Phosphotransferase) domain 1 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37878g00001 Trme-Chr37878 70 1040 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37878g00001 1 60 MAP Kinase Kinase Kinase AT4G38470 91.667 3.68e-35 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Trme37878g00001 Pkinase 4.7e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37878g00001 - - egt:105957803 124.405