Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme378760g00001 ATGTGTGGTACATTAGAGTACATGGCACCTGAAATTATTCTTGGCAAGGGCCATGATAAGGCTGCCGATTGGTGGAGTGTAGGCATCTTATTGTTTGAGATGCTTACCGGAAAG 114 0.4474 MCGTLEYMAPEIILGKGHDKAADWWSVGILLFEMLTGK 38
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme378760g00001 38 ProSiteProfiles Protein kinase domain profile. 1 38 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme378760g00001 38 Gene3D Transferase(Phosphotransferase) domain 1 1 38 - -
Trme378760g00001 38 SUPERFAMILY Protein kinase-like (PK-like) 1 38 IPR011009 -
Trme378760g00001 38 Pfam Protein kinase domain 1 38 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme378760g00001 38 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme378760g00001 Trme-Chr378760 118 231 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme378760g00001 1 38 AGC Kinase Gene Family AT3G08730 89.474 1.66e-21 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Trme378760g00001 Pkinase 4.4e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme378760g00001 K04688 - csin:114266238 84.7297